Query= MSMg01no156_m21.b1 MSMg01no156_m21.b1 CHROMAT_FILE:
MSMg01no156_m21.b1 PHD_FILE: MSMg01no156_m21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:02 2005
(318 letters)
>mm_chr8_125776594_125777310
Length = 717
Score = 580 bits (300), Expect = e-170
Identities = 306/308 (99%), Gaps = 1/308 (0%)
Strand = Plus / Plus
Query: 8 ttccttcaacactgtgctgaggagttcccagacagacacacctctcctctcattactatc 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttccttcaacactgtgctgaggagttcccagacagacacacctctcctctcattactatc 267
Query: 68 caccacatgacggagctgagcttcagtcaggaggctccacagagctgcctgagcagcaat 127
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 caccacatgaaggagctgagcttcagtcaggaggctccacagagctgcctgagcagcaat 327
Query: 128 aagggtttccactctgtgtgacaaagttctcttcctgtgcaactcaaagactagcagtct 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 aagggtttccactctgtgtgacaaagttctcttcctgtgcaactcaaagactagcagtct 387
Query: 188 ttccatgtctcatgaaaagcacttcctgaaatctgaggagaggataagggctcatctgtc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 ttccatgtctcatgaaaagcacttcctgaaatctgaggagaggataagggctcatctgtc 447
Query: 248 aatctcaagttttggcttaggtgaagaatataacattctacagactccagaataattccc 307
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 448 aatctcaagttttggcttaggtgaagaa-ataacattctacagactccagaataattccc 506
Query: 308 tctgctca 315
||||||||
Sbjct: 507 tctgctca 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 717
Length adjustment: 9
Effective length of query: 309
Effective length of database: 708
Effective search space: 218772
Effective search space used: 218772
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no156_m21.g1 MSMg01no156_m21.g1 CHROMAT_FILE:
MSMg01no156_m21.g1 PHD_FILE: MSMg01no156_m21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:02 2005
(283 letters)
>mm_chr8_125970677_125971358
Length = 682
Score = 509 bits (263), Expect = e-148
Identities = 278/285 (97%), Gaps = 5/285 (1%)
Strand = Plus / Minus
Query: 1 tctggagttaaatccaaggtccatccttggcctgctattggcagggtgacctaggcccct 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tctggagttaaatccaaggcccatccttggcctgctattggcagggtgacctaggcccct 423
Query: 61 ccccgggccccaacaatgcaactgggttctagtaggagatggtacctcttaagcttcagt 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 422 ccccgggccccaacaatgcaactgggttctagtaggagatggtacctctcaagcttcagt 363
Query: 121 tcctgtcctacgtcacgaccacatggcctgagctgtccctgccatgggattgcgtgtagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcctgtcctacgtcacgaccacatggcctgagctgtccctgccatgggattgcgtgtagc 303
Query: 181 agaagtgttcaggtccgcacttgtcagaagttaagatcaccagacactctgtcccctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agaagtgttcaggtccgcacttgtcagaagttaagatcaccagacactctgtcccctccc 243
Query: 241 tagg--ttttcagcccacaatgggaacacaaaatctggtggctcc 283
|||| ||||||||||||||||||||||||||||||||||||
Sbjct: 242 tagggc---tcagcccacaatgggaacacaaaatctggtggctcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 682
Length adjustment: 9
Effective length of query: 274
Effective length of database: 673
Effective search space: 184402
Effective search space used: 184402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
