Query= MSMg01no157_m02.b1 MSMg01no157_m02.b1 CHROMAT_FILE:
MSMg01no157_m02.b1 PHD_FILE: MSMg01no157_m02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:09 2005
(338 letters)
>mm_chr8_79667247_79667989
Length = 743
Score = 609 bits (315), Expect = e-179
Identities = 334/343 (97%), Gaps = 5/343 (1%)
Strand = Plus / Plus
Query: 1 attctaaacattctctaggacttgactcagagggttccttcctttccttt-----ttaac 55
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 attctaaacattctctaggacttgactcagagggttccttcctttcctttgttaattaac 260
Query: 56 atgcacataatagattccattatgacattttcatatatgccatccattgtactttattaa 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 atgcacataatagattccattatgacattttcatatatgccatccattgtactttactaa 320
Query: 116 tactcacactctaccccaccccattcctgactggtcccctcttcataaaggcctccttct 175
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactcacactgtaccccaccccattcctgactggtcccctcttcataaaggcctccttct 380
Query: 176 cccccaccccttgtgtagctgtatcttaaagtaacattatatcaattccatatgacttat 235
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccccaccccttgtatagctgtatcttaaagtaacattatatcaattccatatgacttat 440
Query: 236 tccatcttctccgcgctcctgaccctctacaatgtaaaatcttggagatgatggatgggc 295
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccatcttctccacgctcctgaccctctacaatgtaaaatcttggagatgatggatgggc 500
Query: 296 tgtgtgttgactccttcagccttgccttgagaatctttgcaat 338
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtgtgttgactccttcagccttgccttgagaatctttgcaat 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 743
Length adjustment: 9
Effective length of query: 329
Effective length of database: 734
Effective search space: 241486
Effective search space used: 241486
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_m02.g1 MSMg01no157_m02.g1 CHROMAT_FILE:
MSMg01no157_m02.g1 PHD_FILE: MSMg01no157_m02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:09 2005
(120 letters)
>mm_chr8_79803039_79803558
Length = 520
Score = 217 bits (112), Expect = 2e-61
Identities = 118/120 (98%)
Strand = Plus / Minus
Query: 1 tcagcctccaagcacctgaagtgctgatgtagctgtgcagcaccacaccagccaagtccc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tcagcctccaagcacctggagtgctgatgtagctgtgcagcaccacaccagccaagtccc 261
Query: 61 tctcagctctgtaaagtggtggtagctcaggacacaaatgtgtgctcgctcgctcccttg 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tctcagctctgtagagtggtggtagctcaggacacaaatgtgtgctcgctcgctcccttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 120
Length of database: 520
Length adjustment: 8
Effective length of query: 112
Effective length of database: 512
Effective search space: 57344
Effective search space used: 57344
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
