Query= MSMg01no158_f11.b1 MSMg01no158_f11.b1 CHROMAT_FILE:
MSMg01no158_f11.b1 PHD_FILE: MSMg01no158_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:51 2005
(221 letters)
>mm_chr8_80828718_80829338
Length = 621
Score = 422 bits (218), Expect = e-122
Identities = 218/218 (100%)
Strand = Plus / Minus
Query: 4 ggaattccctggctccccagtagagtttggcctgacaataaacaccagtttagtacttta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggaattccctggctccccagtagagtttggcctgacaataaacaccagtttagtacttta 362
Query: 64 tctaatctcagccaggagggaagtgcgccagcaagcttttgcagatgttcacatccaata 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tctaatctcagccaggagggaagtgcgccagcaagcttttgcagatgttcacatccaata 302
Query: 124 atctatccataattgatgaaacagggaggtcagatgtaatggctgctgctatcccagcaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atctatccataattgatgaaacagggaggtcagatgtaatggctgctgctatcccagcaa 242
Query: 184 caaataaatggttattgacaaaacaagccagtgtggca 221
||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caaataaatggttattgacaaaacaagccagtgtggca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no158_f11.g1 MSMg01no158_f11.g1 CHROMAT_FILE:
MSMg01no158_f11.g1 PHD_FILE: MSMg01no158_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:51 2005
(284 letters)
>mm_chr8_80685519_80686200
Length = 682
Score = 538 bits (278), Expect = e-157
Identities = 282/284 (99%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 aggcaaagaaggaaaagctgttctgggggcttctgttggtttgcgcatgtctccatgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggcaaagaaggaaaagctgttctgggggcttctgttggtttgcgcatgtctccatgcaa 260
Query: 61 aaaataaagtattgactcaaggggaaaaaaaaaggtttagaagaattttttaactgatga 120
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 aaaataaagtattgactcaaggggaaaaaaa--ggtttagaagaattttttaactgatga 318
Query: 121 cttcattaatgttattcctctgatttggagctcttttctgagtatctgaaatatttccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 cttcattaatgttattcctctgatttggagctcttttctgagtatctgaaatatttccaa 378
Query: 181 atacatacaagaggctattttctcctaacttctgacttgttgcttgaagtctgtggggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 atacatacaagaggctattttctcctaacttctgacttgttgcttgaagtctgtggggtt 438
Query: 241 tcagaatgtttattcccatctgtttggggtgcctttctgggtat 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcagaatgtttattcccatctgtttggggtgcctttctgggtat 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 682
Length adjustment: 9
Effective length of query: 275
Effective length of database: 673
Effective search space: 185075
Effective search space used: 185075
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
