Query= MSMg01no158_f12.b1 MSMg01no158_f12.b1 CHROMAT_FILE:
MSMg01no158_f12.b1 PHD_FILE: MSMg01no158_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:51 2005
(311 letters)
>mm_chr8_4496513_4497223
Length = 711
Score = 569 bits (294), Expect = e-166
Identities = 303/306 (99%)
Strand = Plus / Minus
Query: 5 gaattccagagggcacctaagcttttctcagtggctgttagctaagaccttctgaggctg 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaattccagagggcacctaaccttttctcagtggctgttagctaagaccttctgaggctg 379
Query: 65 tgctcagagcgtttgcataacttagtcccaggacataccagggcgaggtatggcttagaa 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tgctcagagtgtttgcataacttagtcccaggacataccagggcgaggtatggcttagaa 319
Query: 125 ttgcttaggcgatggttctttcaagatgaaccctagatcagatacaaggttttgataaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 ttgcttaggcgatggttctttcaagatgaaccctagatcagatacaaggttttgataaac 259
Query: 185 aaaaattaacttgctaaaagcgccttttgtgtcacaataaaaagcacttctagaaaaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 aaaaattaacttgctaaaagcgccttttgtgtcacaataaaaagcacttctagaaaaaca 199
Query: 245 tgcatagggatggcctaagccgtctgcacataagtaacagttgtgcacctgggtcttcat 304
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 198 tgcatagggatggcctaagccgtctgcacataagtaacagttgtgcgcctgggtcttcat 139
Query: 305 gtggga 310
||||||
Sbjct: 138 gtggga 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_f12.g1 MSMg01no158_f12.g1 CHROMAT_FILE:
MSMg01no158_f12.g1 PHD_FILE: MSMg01no158_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:51 2005
(281 letters)
>mm_chr8_4410628_4411308
Length = 681
Score = 543 bits (281), Expect = e-159
Identities = 281/281 (100%)
Strand = Plus / Plus
Query: 1 ccttgggtctcttatgtttggaggagagaagagcctaaaaccagggcgagaggagaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttgggtctcttatgtttggaggagagaagagcctaaaaccagggcgagaggagaggct 260
Query: 61 ttcaactggaaagacatttatgatttctaaacctcttacagaagagacactgactggtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcaactggaaagacatttatgatttctaaacctcttacagaagagacactgactggtca 320
Query: 121 gtggtggacaggaccacacctcgatgggagactgcttaggcatgaatagctgtggcctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtggtggacaggaccacacctcgatgggagactgcttaggcatgaatagctgtggcctct 380
Query: 181 acttaaactgtaacctcttgagaatcccagagatggactttgggagcaaggggatcattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acttaaactgtaacctcttgagaatcccagagatggactttgggagcaaggggatcattg 440
Query: 241 tatcccttcgtctgtcttcccaatgtggtcaacattgaata 281
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatcccttcgtctgtcttcccaatgtggtcaacattgaata 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
