Query= MSMg01no158_p06.b1 MSMg01no158_p06.b1 CHROMAT_FILE:
MSMg01no158_p06.b1 PHD_FILE: MSMg01no158_p06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:34 2005
(315 letters)
>mm_chr8_17328334_17329049
Length = 716
Score = 571 bits (295), Expect = e-167
Identities = 307/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 5 gaattcagttcactataagcactcactgctcgaa-catcaccttcccaataaccacatgt 63
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 205 gaattcagttcactataagcactcactgctcgaaacatcaccttcccaataaccacatgt 264
Query: 64 tgaacagatgctttacaaaatctctttatatcatgttcatgtaaaatccactacacagag 123
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 265 tgaacagatgctttagaaaatctctttagatcatgttcatgtaaaatccactacacagag 324
Query: 124 agatgaatggccagaggcagcagctgttgactgaagttaggcaattttctacaggcaggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agatgaatggccagaggcagcagctgttgactgaagttaggcaattttctacaggcaggg 384
Query: 184 caggttgcagaaaggagtcaattgccacccaacccaaggtttaatgtcaataatcttgct 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggttgcagaaaggagtcaattgccacccaacccaaggtttaatgtcaataatcttgct 444
Query: 244 aacagccccaacagctgacaataccccaatcaatatacaacaccaggtcataggtaatat 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 445 aacagccccaacagctgacaataccccaatcaataaacaacaccaggtcataggtaatat 504
Query: 304 ttggggaaacc 314
|||||||||||
Sbjct: 505 ttggggaaacc 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 716
Length adjustment: 9
Effective length of query: 306
Effective length of database: 707
Effective search space: 216342
Effective search space used: 216342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_p06.g1 MSMg01no158_p06.g1 CHROMAT_FILE:
MSMg01no158_p06.g1 PHD_FILE: MSMg01no158_p06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:34 2005
(284 letters)
>mm_chr8_17486387_17487071
Length = 685
Score = 528 bits (273), Expect = e-154
Identities = 282/287 (98%), Gaps = 5/287 (1%)
Strand = Plus / Minus
Query: 1 catactgtgttgagctgcaagtaaaaccagattcaaaacatagaaaagccaaaaaaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 catactgtgttgagctgcaagtaaaaccagattcaaaacatagaaaagccaaaaaaaata 426
Query: 61 gtaagcagatgttagattgtaatttgatggggataaacagaatatttaggtggcgttatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtaagcagatgttagattgtaatttgatggggataaacagaatatttaggtggcgttatc 366
Query: 121 tacaaatataggaagcaaagaaagattttttaaaaa---ctatactatttactctgatca 177
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 365 tacaaatataggaagcaaagaaagatttt--aaaaaaaactatactatttactctgatca 308
Query: 178 atttcaaatgtatagtattttgaattctgttatattttgcttttaaaacaattaactcat 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 atttcaaatgtatagtattttgaattctgttatattttgcttttaaaacaattaactcat 248
Query: 238 ataggccactcaaataattaggttatatggactgtaaaatttagatg 284
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ataggccactcaaataattaggttatatggactgtaaaatttagatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
