Query= MSMg01no159_c16.b1 MSMg01no159_c16.b1 CHROMAT_FILE:
MSMg01no159_c16.b1 PHD_FILE: MSMg01no159_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:50 2005
(321 letters)
>mm_chr8_117397991_117398711
Length = 721
Score = 613 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 5 gaattcctaccctcaccctgccatcctgacccccctccccagccaccagatcaatattgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaccctcaccctgccatcctgacccccctccccagccaccagatcaatattgt 264
Query: 65 aatctcagcctatttgttttgcctctataaacctcctcctagggctgtagagagagatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatctcagcctatttgttttgcctctataaacctcctcctagggctgtagagagagatca 324
Query: 125 gtggataaaggtgcttgccgccaagtctgaagatccaagtttgattcctgggatgtactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtggataaaggtgcttgccgccaagtctgaagatccaagtttgattcctgggatgtactt 384
Query: 185 ggtgggaggagggaacagaatgctctgagttgtcttctgaccttcatatacaccccatag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggtgggaggagggaacagaatgctctgagttgtcttctgaccttcatatacaccccatag 444
Query: 245 catgcaaacaaacaaataaatacataaataaggtaacaataacaactatcaaatctctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catgcaaacaaacaaataaatacataaataaggtaacaataacaactatcaaatctctcc 504
Query: 305 ctctagaagccatgtat 321
|||||||||||||||||
Sbjct: 505 ctctagaagccatgtat 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_c16.g1 MSMg01no159_c16.g1 CHROMAT_FILE:
MSMg01no159_c16.g1 PHD_FILE: MSMg01no159_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:50 2005
(276 letters)
>mm_chr8_117534014_117534689
Length = 676
Score = 499 bits (258), Expect = e-146
Identities = 273/280 (97%), Gaps = 5/280 (1%)
Strand = Plus / Minus
Query: 1 cattacattcctgaagagaaagcaggcttcccaaggaatcttgcccccaaccttccctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cattacattcctgaagagaaagcaggcttcccaaggaatcttgcccccaaccttccctca 282
Query: 61 gagtccaatctaaacaggaggaagtgtctgggttcagctgagacagtgtttcttgaaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gagtccaatctaaacaggaggaagtgtctgggttcagctgagacagtgtttcttgaaagc 222
Query: 121 tgcctgctatgtagctctcggaaatt----aaaaaaaaaaaaaaaaaagggtgtgtgggg 176
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 221 tgcctgctatgtagctctcggaaatttaaaaaaaaaaaaaaaaaaaaagggtgtgtgggg 162
Query: 177 attccaagccttgtgctggccattttggtgcctcttggttctggtgaatgtctaaattct 236
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 161 attccaagcctcgtgctggccattt-ggtgcctcttggttctggtgaatgtctaaattct 103
Query: 237 gaagattttagccctaacatatttaaaatttctggccgga 276
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 102 gaagattttagccctaacatatttaagatttctggccgga 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
