CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCACACTGGGAGTCCCAAGCCGCTGATTTTTCACAACCCTGAAGTCCT
CCTTTGGAATCAGGGGTGGTGTCTCTGTAGTGGCTTTGGCCAGCCTTTTC
AGCTGCTCTTTCCTTCTCTGGTACTCCAACCCTTCCAAAGCAGGACAGTG
TGAAGTTGGGAGAGCAAGCCTTTCTCTTCACCCACATGGCTTCCTTTGGA
AGCAGATACGCCCTTTCTGCCTGGGCCCCCATGGTCATGTCCGGAGCTCA
CCAGCTCACAACAGAGATGCCCTGCGCTGGTAAATCAGAAGCACAGAATC
CCAAGAGTCATTGCTTCCACTCACAATTACACGCTCATCTATCTGACTTT
GGGAAAAGCTGGCCTTGGAAGCCTTTAGTTGGGGTGGCGGGGGTGGAGGA
CTGGGGGATGAGGGGGCNCNTCCCCCNCTCCCCCCCCTCNCCCCTCTTCT
CTCTTTTTCTGCTCTCTCCCTGTCCTCCGCCCCCCCTCCTCGCTTGTTCC
TTCTTTTTTTCCTGTCTTCTCTCTTGCTCCGTCTCGCTCTTCCTTCTTCT
CTTCTCTCCTCGTTCCTTTCCTCCGTCGTCATATCACCTTCCATCAAACC
CGCATCTTTTATATGGACAGTTTTCCCTACCTGCCTACTGCAAAGCTGAT
TTACCTCAATATAACTATTTCTTCTCTATTTTTTTATCACAG

ATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTCCCATTGAAAAATGTTTTCCCTGCT
AACAGATTTTTTTTATCTTTGAGTAAGAATGGCGGCAGGGGTAAGAAATG
GCTGTTGTCATTTTCAGAGACACATGGCAAGGGGTGCCTGTCCCCCGGGG
AATGCAAGCAGAGAAGGAGCTGAGAGGTTATCATCTGGCTCATTAAGGGA
CATCTCAGAGTGAGGTAGCCAGAATAGCATGTGAGAGGCTGGAGTCTCCA
GGGAAAGCTTGGATAATGAATAGCGATCGCTTGCTTTTACCTGAGAGATG
CTGAGCTTTTTTTCTTCCCTCCCCCCTACTGTACTCTGCCGCACGGTGGA
CTGGGGAAGGTCCTCTCCGGACCACGAAAGTGTTTGTGGTGCAGAACAGA
GTGGCCAAGAGTGACACAGAGTAAAATGGAACTCTGAAACAAAGGACAGG
TAAAGATTGTACACCTACGGCTGGAGTCCTGTACACCACTCCTTGATGTT
TGAGAAAGATGATATAAAGTATACGACTTTTATATAGCGAATAGTAAAGT
TAGGACACTTCCGAGTGAGCAGATTAATGAGCTCAGAGATGACAGATACT
AAAAGCATATACGCAGTCAGGAAAGGAGTGGGCAAATCAGTCTACAGTGC
CGGGACGACCTTTATCCACTCACATCTTTTGATAAG

Query= MSMg01no159_p08.b1 MSMg01no159_p08.b1 CHROMAT_FILE:
MSMg01no159_p08.b1 PHD_FILE: MSMg01no159_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:47 2005
         (327 letters)



>mm_chr8_36307569_36308295
          Length = 727

 Score =  617 bits (319), Expect = 0.0
 Identities = 322/323 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccacactgggagtcccaagccgctgatttttcacaaccctgaagtcctcctttg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 ggaattccacactgggagtcccaagccgctgatttttcacaaccctgaagtcctcctttg 467

                                                                       
Query: 64  gaatcaggggtggtgtctctgtagtggctttggccagccttttcagctgctctttccttc 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaatcaggggtggtgtctctgtagtggctttggccagccttttcagctgctctttccttc 407

                                                                       
Query: 124 tctggtactccaacccttccaaagcaggacagtgtgaagttgggagagcaagcctttctc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tctggtactccaacccttccaaagcaggacagtgtgaagttgggagagcaagcctttctc 347

                                                                       
Query: 184 ttcacccacatggcttcctttggaagcagatacgccctttctgcctgggcccccatggtc 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ttcacccacatggcttcctttggaagcagatacgccctttctgcctgggcccccatggtc 287

                                                                       
Query: 244 atgtccggagctcaccagctcacaacagagatgccctgcgctggtaaatcagaagcacag 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atgtccggagctcaccagctcacaacagagatgccctgcgctggtaaatcagaagcacag 227

                                  
Query: 304 aatcccaagagtcattgcttcca 326
           ||||||||||| |||||||||||
Sbjct: 226 aatcccaagagccattgcttcca 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space:   228324
Effective search space used:   228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no159_p08.g1 MSMg01no159_p08.g1 CHROMAT_FILE:
MSMg01no159_p08.g1 PHD_FILE: MSMg01no159_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:47 2005
         (309 letters)



>mm_chr8_36177625_36178333
          Length = 709

 Score =  598 bits (309), Expect = e-175
 Identities = 309/309 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagtgtttgtggtgcagaacagagtggccaagagtgacacagagtaaaatggaactctga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtgtttgtggtgcagaacagagtggccaagagtgacacagagtaaaatggaactctga 260

                                                                       
Query: 61  aacaaaggacaggtaaagattgtacacctacggctggagtcctgtacaccactccttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaaggacaggtaaagattgtacacctacggctggagtcctgtacaccactccttgat 320

                                                                       
Query: 121 gtttgagaaagatgatataaagtatacgacttttatatagcgaatagtaaagttaggaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttgagaaagatgatataaagtatacgacttttatatagcgaatagtaaagttaggaca 380

                                                                       
Query: 181 cttccgagtgagcagattaatgagctcagagatgacagatactaaaagcatatacgcagt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttccgagtgagcagattaatgagctcagagatgacagatactaaaagcatatacgcagt 440

                                                                       
Query: 241 caggaaaggagtgggcaaatcagtctacagtgccgggacgacctttatccactcacatct 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggaaaggagtgggcaaatcagtctacagtgccgggacgacctttatccactcacatct 500

                    
Query: 301 tttgataag 309
           |||||||||
Sbjct: 501 tttgataag 509


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space:   210000
Effective search space used:   210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)