Query= MSMg01no163_d08.b1 MSMg01no163_d08.b1 CHROMAT_FILE:
MSMg01no163_d08.b1 PHD_FILE: MSMg01no163_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:45 2005
(511 letters)
>mm_chr8_34143077_34143987
Length = 911
Score = 944 bits (488), Expect = 0.0
Identities = 497/500 (99%)
Strand = Plus / Minus
Query: 4 ggaattctccaagtctccagtgccagacggggactacagagccagctagtgtggtagagt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 ggaattctccaagtcttcagtgccagacggggactacagagccagctagtgtggtagagt 837
Query: 64 gagcagctctttggatctttgtctccctagtgtgggacaaccattgctggactaccccga 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gagcagctctttggatctttgtctccctagtgtgggacaaccattgctggactaccccga 777
Query: 124 ctgtagcacacagacaatctaaccaatccccctttcagatacacacatacacacacacac 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ctgtagcacacagacaatctaaccaatccccctttcagatacacacatacacacacacac 717
Query: 184 acacacacacacacacacacacacacacgcacacacatatatcctgtcagtccattcctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 acacacacacacacacacacacacacacgcacacacatatatcctgtcagtccattcctt 657
Query: 244 tagagaactccagctaatacattgacttttgtccaaacatatcacaatatagctgtttac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tagagaactccagctaatacattgacttttgtccaaacatatcacaatatagctgtttac 597
Query: 304 atctctgaccccagtccaattattgcctttctgaagcctgctgtgaagtgtcttagtgta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 atctctgaccccagtccaattattgcctttctgaagcctgctgtgaagtgtcttagtgta 537
Query: 364 atgtcacaataataattgccttatcatagttacaggtctcatgtaccttcaaggagaaag 423
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 atgtcataataataattgccttatcatagttacaggtctcatgtaccttcaaggagaaag 477
Query: 424 cattacagagattatatatgtatatatatatatatatatatatatatatatatatatata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cattacagagattatatatgtatatatatatatatatatatatatatatatatatatata 417
Query: 484 tatatatatatatatatata 503
|||||||||||| |||||||
Sbjct: 416 tatatatatatacatatata 397
Score = 124 bits (64), Expect = 2e-32
Identities = 67/68 (98%)
Strand = Plus / Plus
Query: 436 tatatatgtatatatatatatatatatatatatatatatatatatatatatatatatata 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tatatatgtatatatatatatatatatatatatatatatatatatatatatatatatata 456
Query: 496 tatatata 503
|||||||
Sbjct: 457 catatata 464
Score = 120 bits (62), Expect = 2e-31
Identities = 68/70 (97%)
Strand = Plus / Plus
Query: 442 tgtatatatatatatatatatatatatatatatatatatatatatatatatatatatata 501
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgtatatatgtatatatatatatatatatatatatatatatatatatatatatatatata 454
Query: 502 tatatatata 511
|| |||||||
Sbjct: 455 tacatatata 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 176
Number of extensions: 78
Number of successful extensions: 78
Number of sequences better than 10.0: 1
Number of HSP's gapped: 52
Number of HSP's successfully gapped: 13
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_d08.g1 MSMg01no163_d08.g1 CHROMAT_FILE:
MSMg01no163_d08.g1 PHD_FILE: MSMg01no163_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:45 2005
(641 letters)
>mm_chr8_33977250_33978290
Length = 1041
Score = 1239 bits (641), Expect = 0.0
Identities = 641/641 (100%)
Strand = Plus / Plus
Query: 1 catcagaccatcttgtcctgaaagcccccatgattctaacagcagaccaaatgacctgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcagaccatcttgtcctgaaagcccccatgattctaacagcagaccaaatgacctgaa 260
Query: 61 tgcaaatagaggttctgcctcccagcagctaggatgtgacctttaaaattctgtaaatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaaatagaggttctgcctcccagcagctaggatgtgacctttaaaattctgtaaatct 320
Query: 121 ttctgaatcttgagataaaatcggaataaaatgatatatcttgcaagattgatgttaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctgaatcttgagataaaatcggaataaaatgatatatcttgcaagattgatgttaagg 380
Query: 181 aataagtatggtaaaatatgtaaaaaggaaaagaaaagtagtacaaactcagtcaattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aataagtatggtaaaatatgtaaaaaggaaaagaaaagtagtacaaactcagtcaattct 440
Query: 241 aaatctccttttcttacctattttttttttcctttttagagaagttatggcttctttatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatctccttttcttacctattttttttttcctttttagagaagttatggcttctttatc 500
Query: 301 tgggaactccgattccaaacctaaatacacactatagttccatcgctttccaaaatgctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggaactccgattccaaacctaaatacacactatagttccatcgctttccaaaatgctg 560
Query: 361 attcttgggacaaaccctgaaccaaatgtttcttgtctccaggggtctcagccaggacta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attcttgggacaaaccctgaaccaaatgtttcttgtctccaggggtctcagccaggacta 620
Query: 421 gtcacacgaaatactatctctatgacaatatcttgggagacagcatattctaaagtgcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtcacacgaaatactatctctatgacaatatcttgggagacagcatattctaaagtgcaa 680
Query: 481 accactagtctcccctagattcacaacttctggcccactaatcatcgatgcttctccagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 accactagtctcccctagattcacaacttctggcccactaatcatcgatgcttctccagg 740
Query: 541 gtccaccagactgagggtcccacggctgaagtcagagttttcagaacagttgttcttcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtccaccagactgagggtcccacggctgaagtcagagttttcagaacagttgttcttcat 800
Query: 601 ttttagagatttcctttttattatttcctccatttcctctg 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ttttagagatttcctttttattatttcctccatttcctctg 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1041
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1031
Effective search space: 650561
Effective search space used: 650561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
