AATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCCATTCACATAGTTACATAATCTTATTTTTCAGCAATATGTCA
GTATGTTGGCTTGATTTCTTGTAAAATTTCTATATATTAATATCTTACAT
TTTCATTCAGTTCTTCACCTTGAGTGCTCACAGGACTTTATTTATTAAAT
GATATTCTTGATGACTGACTACAAATGTAATTACTTATGTTGTTCAACTT
CAAGTCATGATGGTAAATAAACATCAAACTACCTCTATTTTTCAAAAGAG
CATACAGAGTCAACTAACCTGAAACTTAGCTCTCAGAAACTGAGCTACCA
ACCAAAGAATATTTTTGGCCTACCACCGACCACCCTGGCACATATGAAGT
AGACATGCAGCTCGGCCCCCATGTGGGTCTCCTGACAAATGGAGCTGAGG
CTCTCCCTAAAGCTGTTGCCTGTCTGGTATCCATTCCCAAATAGGACTGC
CTTATCTAGCCTCAGTATAAGAGGGTACAACTACTCTGGTAGAGATTTTA
TGCACCAGGATTGGGGATACCCCTGGGGGAGCACCTTCTCAAAGGAGCAG
GTGATAGAAGATGGAAGATGGAGAAAGGATCACTGAGAGGGGAAGACTGG
GAAGGGGCAGCATTTACAAAGTAAATAAATAAATGTTAATTAACAACAAC
AACAAGAACATCCAGTAGTGCTAGGCATGGTAGCACAGGCN

GCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXAACAGCAGTTTAATTTCAGTTTT
CTTTGAAGAATTAGTTTTTCTGTAAAATTGAAGCACAAAAATTTTTATCT
GGTTTATGAAGTGATATTTGATTGCATAGTATAATTTTCATATGTGAGAG
TAAAACAACAAAATTTGCATCTTATATAAATAATGGGTTCATTTGCTAAC
CTTAGAAAAGTGATGTGTTTATTTCATAGGATTTCCTTATCAACAATTAA
ATATGAACATATAAATAGATTTGATTTACTAGTTGTAAAAAGATGGGGAG
CAGATTTCACAATGTATTAACCACCCCCTGATTCTTTAAAGGAAATTATA
TTACGTAGTTACAGGAAAACGGGATAAACCTATTTAAAAGATTCATGTGT
ATACAATGATAGATGGCAGACCTGTTGACTCTCAGATTTCCAACTTTGTT
TGGCTCCAACTGGGCTGAAATATTTTACACGGCACATGCATAACACTTTA
AGGCACATAGTTCCACCACAAAGATAGTACTCTTCATAAATTGCTTCAAT
TCCAAAAACTGTGGTTTTAGAGGTTCTCCCCATGCCTAATTGACTCTAAA
TATTTCTGAAGAAAAAAGCAGATTATTTATTTTTCTTTCATTTATATGGG
GAATTATCTCTAGACAGTCCTGTTTATGACTGTAAAAAAAA

Query= MSMg01no163_n10.b1 MSMg01no163_n10.b1 CHROMAT_FILE:
MSMg01no163_n10.b1 PHD_FILE: MSMg01no163_n10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:31 2005
         (315 letters)



>mm_chr8_103278181_103278895
          Length = 715

 Score =  574 bits (297), Expect = e-168
 Identities = 303/305 (99%)
 Strand = Plus / Plus

                                                                       
Query: 9   tccattcacatagttacataatcttatttttcagcaatatgtcagtatgttggcttgatt 68
           |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 209 tccattcacatagttacataatcttatttttcagcaatatatcaatatgttggcttgatt 268

                                                                       
Query: 69  tcttgtaaaatttctatatattaatatcttacattttcattcagttcttcaccttgagtg 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcttgtaaaatttctatatattaatatcttacattttcattcagttcttcaccttgagtg 328

                                                                       
Query: 129 ctcacaggactttatttattaaatgatattcttgatgactgactacaaatgtaattactt 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctcacaggactttatttattaaatgatattcttgatgactgactacaaatgtaattactt 388

                                                                       
Query: 189 atgttgttcaacttcaagtcatgatggtaaataaacatcaaactacctctatttttcaaa 248
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 atgttgttcaacttcaagtcatgatggtaaataaacatcaaactacctctatttttcaaa 448

                                                                       
Query: 249 agagcatacagagtcaactaacctgaaacttagctctcagaaactgagctaccaaccaaa 308
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agagcatacagagtcaactaacctgaaacttagctctcagaaactgagctaccaaccaaa 508

                
Query: 309 gaata 313
           |||||
Sbjct: 509 gaata 513


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space:   216036
Effective search space used:   216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no163_n10.g1 MSMg01no163_n10.g1 CHROMAT_FILE:
MSMg01no163_n10.g1 PHD_FILE: MSMg01no163_n10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:31 2005
         (283 letters)



>mm_chr8_103427648_103428330
          Length = 683

 Score =  516 bits (267), Expect = e-151
 Identities = 279/283 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacagcagtttaatttcagttttctttgaagaattagtttttctgtaaaattgaagcaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 483 aacagcagtttaatttcagttttctttgaagaattagtttttctgtataattgaagcaca 424

                                                                       
Query: 61  aaaatttttatctggtttatgaagtgatatttgattgcatagtataattttcatatgtga 120
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 aaattttttatctggtttatgaagtgatatttgattgcatagtataattttcatatgtga 364

                                                                       
Query: 121 gagtaaaacaacaaaatttgcatcttatataaataatgggttcatttgctaaccttagaa 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 363 gagtaaaacaacaaaatttgcatcttatataaataatgagttcatttgctaaccttagaa 304

                                                                       
Query: 181 aagtgatgtgtttatttcataggatttccttatcaacaattaaatatgaacatataaata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 aagtgatgtgtttatttcataggatttccttatcaacaattaaatatgaacatataaata 244

                                                      
Query: 241 gatttgatttactagttgtaaaaagatggggagcagatttcac 283
           |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 243 gatttgatttactagttgtaaaaagatggggatcagatttcac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space:   184676
Effective search space used:   184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)