XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCTAATTTATTATTTTTTTATTTGCTTTCTTAACTCTTACCTACTTATAT
ATTAATTCATTTTTCATATTCTTACTTCAAACAACAGCTTGTGGAGTTAT
TGTCTATGGTTTCATGGAGATCTTTGCTTTTAGTCTTTGGGTAAACTAAG
GATAAATGTGGGATTTCATCTAGACTACTTAAAATAGTAAAAACTCTAGT
CTTCTTTCTTTCTCTCAGGGAACCAAGGCTAGTGACTAACAGTTGGAACC
CATGAAACTAATCAATAAGGAACATGATGTCTCATAAGTACTAGGATGTT
GCAAAGAAAAACCTTAACACTGGGCTCAGTGATGCTGTGTAACATAGCCC
AGCACTTCTTCCTTGCTCTTTGTATTTACACTATAAATACTGCTTTATTC
ACTGAGTGTAAAAGCTTCCATAAGATCCCTAGAGATGTAAGTAAGCATAT
TTTTACGAACATCATGTTTAAATATACACAGGTCATGAATATTTCAATCC
TGAATTTATCCTGTTTTTCAGTAATTCAGGACGTGTGATTGTCCACTGAA
TCTTTGCACAAGTTTTGTTCATTTTTCTAACTCCTCTGTTCACTCACTCA
AAAAATTAATAGTACCTATTTAATGTGTTCAAAAAAGTTTATGCCTCCTC
TGTAAACCTAATATGAGN

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTAGAACTTCTTTAATTTCTTTATTTCTT
CCTTGACCCAGAGATCATTGAGTAGAGAGTTGTTCAGTTCCCATGACTGT
GTAGGCTTTCTGGTTTTTCTGTTGTTATTGAAGTCCACCTTTAACCTACT
GTGTTCTGATAGGATGCAAGGGGTCATTTCAAATTTTTTGTATCTGAAGA
GGCTTTCTTTGTGACCAATGATATGGTCAATTTTGGAGAAAGTTCCAGAA
GATGATGAGAAAAAGTTACATGCTCTTGATTTGGGGTGAAATATTCTACA
CATAATGCTTAGGTCCATTTGATTGATAACATCTGTTAGTTTTATTATTT
CTCCATTTAGTTTTTGTCTGAATGACCTGTAGATTGGTGAAAGAGAAGTG
TTGAAGTCTCCCATTAATAATCTATGGGGTTTGGTGTATGCTTTAAGCTT
TAATAGTGTTCTCTTACAAACGTGGTTGTCCTTGTGTTTGAAACTTAGAT
GTTCAGAATTGAGATATCATCTCAGTAGATTTTTCTTTTGATGAGTATGA
AGCATACTCATACAGGGAAGCCTGTATGAAGTATATGAAGTATATGAAGT
ATACTCATACATTATGAAGGATACTCATACAGGGAAGCCTGTCTCTTTTG
ATTACCTTTGGTTAAAAGT

Query= MSMg01no165_d08.g1 MSMg01no165_d08.g1 CHROMAT_FILE:
MSMg01no165_d08.g1 PHD_FILE: MSMg01no165_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:17 2005
         (640 letters)



>mm_chr8_19961215_19962254
          Length = 1040

 Score = 1203 bits (622), Expect = 0.0
 Identities = 635/640 (99%), Gaps = 2/640 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tagaacttctttaatttctttatttcttccttgacccagagatcattgagtagagagttg 60
           |||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 203 tagaacgtctttaatttctttatttcttccttgacccagagatcattgagt--agagttg 260

                                                                       
Query: 61  ttcagttcccatgactgtgtaggctttctggtttttctgttgttattgaagtccaccttt 120
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcagttcccatgagtgtgtaggctttctggtttttctgttgttattgaagtccaccttt 320

                                                                       
Query: 121 aacctactgtgttctgataggatgcaaggggtcatttcaaattttttgtatctgaagagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacctactgtgttctgataggatgcaaggggtcatttcaaattttttgtatctgaagagg 380

                                                                       
Query: 181 ctttctttgtgaccaatgatatggtcaattttggagaaagttccagaagatgatgagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctttctttgtgaccaatgatatggtcaattttggagaaagttccagaagatgatgagaaa 440

                                                                       
Query: 241 aagttacatgctcttgatttggggtgaaatattctacacataatgcttaggtccatttga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagttacatgctcttgatttggggtgaaatattctacacataatgcttaggtccatttga 500

                                                                       
Query: 301 ttgataacatctgttagttttattatttctccatttagtttttgtctgaatgacctgtag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttgataacatctgttagttttattatttctccatttagtttttgtctgaatgacctgtag 560

                                                                       
Query: 361 attggtgaaagagaagtgttgaagtctcccattaataatctatggggtttggtgtatgct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 attggtgaaagagaagtgttgaagtctcccattaataatctatggggtttggtgtatgct 620

                                                                       
Query: 421 ttaagctttaatagtgttctcttacaaacgtggttgtccttgtgtttgaaacttagatgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaagctttaatagtgttctcttacaaacgtggttgtccttgtgtttgaaacttagatgt 680

                                                                       
Query: 481 tcagaattgagatatcatctcagtagatttttcttttgatgagtatgaagcatactcata 540
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagaattgagatatcatctcagtagatttttcttttgatgagtatgaagcatactcata 740

                                                                       
Query: 541 cagggaagcctgtatgaagtatatgaagtatatgaagtatactcatacattatgaaggat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagggaagcctgtatgaagtatatgaagtatatgaagtatactcatacattatgaaggat 800

                                                   
Query: 601 actcatacagggaagcctgtctcttttgattacctttggt 640
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 actcatacagggaagcctgtctcttttgattacctttggt 840


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)