Query= MSMg01no165_d17.b1 MSMg01no165_d17.b1 CHROMAT_FILE:
MSMg01no165_d17.b1 PHD_FILE: MSMg01no165_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:18 2005
(700 letters)
>mm_chr8_42895850_42896949
Length = 1100
Score = 1346 bits (696), Expect = 0.0
Identities = 696/696 (100%)
Strand = Plus / Minus
Query: 5 gaattcttggtgtacttccaaagaaaccatttccaatgagaactttcactctctctcatc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 gaattcttggtgtacttccaaagaaaccatttccaatgagaactttcactctctctcatc 885
Query: 65 cataggcacccttcaaacctagaaatacctgtttgtcatctgtgtttgttactggccctc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 cataggcacccttcaaacctagaaatacctgtttgtcatctgtgtttgttactggccctc 825
Query: 125 tgaagcagaattgcaagtagcaacagaggctacatctagcttatcttcaaatgcatgaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 tgaagcagaattgcaagtagcaacagaggctacatctagcttatcttcaaatgcatgaga 765
Query: 185 aatatataaaaatatatgaaaatatataaaatataaaaggtagtctctgcctacttgtat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aatatataaaaatatatgaaaatatataaaatataaaaggtagtctctgcctacttgtat 705
Query: 245 tttccatcttaaagccacattgcctatattttaaatgacagattttgaggggccaccaac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tttccatcttaaagccacattgcctatattttaaatgacagattttgaggggccaccaac 645
Query: 305 agtatttgagattcttatgactgtggaactcactatcctatacgtctcttagttaccaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agtatttgagattcttatgactgtggaactcactatcctatacgtctcttagttaccaca 585
Query: 365 tcctaagagggggttaagatgacatctctgtctactacacaatggccatgatgccaaatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tcctaagagggggttaagatgacatctctgtctactacacaatggccatgatgccaaatg 525
Query: 425 ctgagctaagagaaaagaaaagatacagggagtagaatgagagttttaactcaaaaccag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ctgagctaagagaaaagaaaagatacagggagtagaatgagagttttaactcaaaaccag 465
Query: 485 catttgttctttatgttgttttgcagactcctatttccatattgtgtcagtgaatttttc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 catttgttctttatgttgttttgcagactcctatttccatattgtgtcagtgaatttttc 405
Query: 545 attgctgtgacaaaaaatatctgggaaatgagcttaaaagagaaaagaattattttggct 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 attgctgtgacaaaaaatatctgggaaatgagcttaaaagagaaaagaattattttggct 345
Query: 605 cacttccataaaaattccattccatggtcagtcggctcctttatttttggtcctatggca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cacttccataaaaattccattccatggtcagtcggctcctttatttttggtcctatggca 285
Query: 665 agtcaagaacatcatggcatgatgcacagagtggag 700
||||||||||||||||||||||||||||||||||||
Sbjct: 284 agtcaagaacatcatggcatgatgcacagagtggag 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 700
Length of database: 1100
Length adjustment: 10
Effective length of query: 690
Effective length of database: 1090
Effective search space: 752100
Effective search space used: 752100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_d17.g1 MSMg01no165_d17.g1 CHROMAT_FILE:
MSMg01no165_d17.g1 PHD_FILE: MSMg01no165_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:18 2005
(657 letters)
>mm_chr8_42868681_42869737
Length = 1057
Score = 1253 bits (648), Expect = 0.0
Identities = 654/656 (99%), Gaps = 1/656 (0%)
Strand = Plus / Plus
Query: 1 attcacattactagcatgagtgatggtaaaaggaagcaacacattggtttttatatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcacattactagcatgagtgatggtaaaaggaagcaacacattggtttttatatggtt 260
Query: 61 tgtatgaagtgcttatgccagatgcacaatatcctacaagcaaaatgcaagtgttcttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtatgaagtgcttatgccagatgcacaatatcctacaagcaaaatgcaagtgttcttat 320
Query: 121 tttccacataataaaaagtaactgcgaaggaggttcaccgtgcatgatactgactgactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttccacataataaaaagtaactgcgaaggaggttcaccgtgcatgatactgactgactt 380
Query: 181 gtctgagaccagcaaaataagactctttatatgaaacaaattttataaaatatgatttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtctgagaccagcaaaataagactctttatatgaaacaaattttataaaatatgatttta 440
Query: 241 cacatagatatgcttcaagggacaacagaagcctgagattcactcctttctggtctctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacatagatatgcttcaagggacaacagaagcctgagattcactcctttctggtctctcc 500
Query: 301 tggctctagaatgaactcagggtgatatacccaaggttgttcacatccagggacttagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggctctagaatgaactcagggtgatatacccaaggttgttcacatccagggacttagtt 560
Query: 361 ttcattgtcctgaccagatggctaagttgttggcaacaaaccgaatttgtgaaaatgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttcattgtcctgaccagatggctaagttgttggcaacaaaccgaatttgtgaaaatgtga 620
Query: 421 taaaaaatagtggtaattgtaggtgatgtggtccattggttggagcatcttcactctgta 480
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaaaaatagtggta-ttgtaggtgatgtggtccattggttggagcatcttcactctgta 679
Query: 481 tttgttaaaggatgctgatttactagcagagtggtagtggctgctctatgaatatatctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tttgttaaaggatgctgatttactagcagagtggtagtggctgctctatgaatatatctg 739
Query: 541 cctattaattggcaaaaacatcattaaacctatgctgtctgcagttagcatgcatgattc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cctattaattggcaaaaacatcattaaacctatgctgtctgcagttagcatgcatgattc 799
Query: 601 ttgattcttaggccccaataaccatgcaggaagccaaagcatttcctcttgcatgg 656
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttgattcttaggcccaaataaccatgcaggaagccaaagcatttcctcttgcatgg 855
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
