Query= MSMg01no165_n13.b1 MSMg01no165_n13.b1 CHROMAT_FILE:
MSMg01no165_n13.b1 PHD_FILE: MSMg01no165_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:09 2005
(244 letters)
>mm_chr8_28795079_28795722
Length = 644
Score = 379 bits (196), Expect = e-110
Identities = 237/262 (90%), Gaps = 18/262 (6%)
Strand = Plus / Plus
Query: 1 agcttatatgtgagatctcaaagccc------------------ttcctccagcaaggcc 42
|||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 183 agcttatatgtgagatctcaaagcccacctccacagtgacacacttcctccagcaaggcc 242
Query: 43 acacttcctaacagtgccactcgctatgagccaagcattcaaacacttgaacctgtggag 102
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 243 acacttcctaacagtgccactccctatgagccaagcattcaaacacttgaacctgtggag 302
Query: 103 gtcaaacctatttaagccataggtgtaacgataaatattttgaatgcagtgaggaattat 162
||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 303 gtcaaacctatttaaaccataggtgtaacgataaatatttagaatgcagtgaggaattat 362
Query: 163 attggtttatggatgtgaaagagctctgtgggcttaccatctactggtagtttgtctaca 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 363 attggtttatggatgtgaaagagctctgtgggcttaccatctactggtagtttgtttata 422
Query: 223 gttacagtaccagcaagtgatt 244
|||| |||||||||||| ||||
Sbjct: 423 gttatagtaccagcaagagatt 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no165_n13.g1 MSMg01no165_n13.g1 CHROMAT_FILE:
MSMg01no165_n13.g1 PHD_FILE: MSMg01no165_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:34:10 2005
(245 letters)
>mm_chr8_28943763_28944407
Length = 645
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Minus
Query: 1 cttcaatggattttgtatttttcaaagacaaaaattaaattacctcatagaccatcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cttcaatggattttgtatttttcaaagacaaaaattaaattacctcatagaccatcttga 386
Query: 61 ggaatgaggagacaaaacaaaataatgtcaagagtatgacattggattcataaactggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggaatgaggagacaaaacaaaataatgtcaagagtatgacattggattcataaactggta 326
Query: 121 gacatgttctagctaaccatgaattagctgtgggaaaatcattttttaaaccacattctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacatgttctagctaaccatgaattagctgtgggaaaatcattttttaaaccacattctc 266
Query: 181 cttccatatacaaaagagctaaaattacctctttttaacccttatgcgattaaaaagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cttccatatacaaaagagctaaaattacctctttttaacccttatgcgattaaaaagtag 206
Query: 241 ctctc 245
|||||
Sbjct: 205 ctctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
