Query= MSMg01no166_m06.b1 MSMg01no166_m06.b1 CHROMAT_FILE:
MSMg01no166_m06.b1 PHD_FILE: MSMg01no166_m06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:22 2005
(314 letters)
>mm_chr8_119162264_119162976
Length = 713
Score = 569 bits (294), Expect = e-166
Identities = 306/310 (98%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaaagcatacatctttttttctccattgtgaatcctggatgtcccccttgtacg 63
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 512 ggaattcaaagcatacatc-ttttttctccattgtgaatcctggatgtcccccttctacg 454
Query: 64 agttacatcccctaagaatctcagggatgttcccaggcttgcttgctttctcagttaatt 123
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agttacatcccctaagactctcagggatgttcccaggcttgcttgctttctcagttaatt 394
Query: 124 tatttttcctgccctggtgcgacactcgcgatgctggtggctttttacaatcatgtttaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 tatttttcctgccctggtgcgacactcgcgatgctggtggctttttacaatcatgtttaa 334
Query: 184 ttatgtaattggggaaatgctttcccgctatgcttttttaaagactccttgcctattttt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ttatgtaattggggaaatgctttcccgctatgcttttttaaagactccttgcctattttt 274
Query: 244 gtttaaggctcccagtggtttccccgagcatcattctgtatcgcactagcaatggactca 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 273 gtttaaggctcccagtggtttccccgagcatcattctgtagcgcactagcaatggactca 214
Query: 304 ttgggattct 313
||||||||||
Sbjct: 213 ttgggattct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_m06.g1 MSMg01no166_m06.g1 CHROMAT_FILE:
MSMg01no166_m06.g1 PHD_FILE: MSMg01no166_m06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:22 2005
(676 letters)
>mm_chr8_118990631_118991710
Length = 1080
Score = 1247 bits (645), Expect = 0.0
Identities = 670/680 (98%), Gaps = 4/680 (0%)
Strand = Plus / Plus
Query: 1 aaattgaactgaatgtccaatatttttatttgctaaggttgaaaaacatccctttttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaattgaactgaatgtccaatatttttatttgctaaggttgaaaaacatccctttttgtt 260
Query: 61 acattcccagaaagtcattggataacatatctcaaagtaattaggagaaaaaaaaatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acattcccagaaagtcattggataacatatctcaaagtaattaggagaaaaaaaaatgaa 320
Query: 121 aatgccaggctgagagcccacttcttgactctcagttacagaatataatgcttttct-aa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 aatgccaggctgagagcccacttcttgactctcagttacagaatataatgcttttctaaa 380
Query: 180 aaaaaacctgttagtggcatctgggccagtctcctcctgagacttctctaaacaccactg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaaacctgttagtggcatctgggccagtctcctcctgagacttctctaaacaccactg 440
Query: 240 gtttgatttttgtaattgcgacatttccccttttcctttgggctttgttagaatccacag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttgatttttgtaattgcgacatttccccttttcctttgggctttgttagaatccacag 500
Query: 300 agctgattctgagcacttggctgctcagcttctctggcattcaatgtctctgctctacac 359
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 agctgattctgagcacttggctgctcagcttctctggcattcaatgtctcagctctacac 560
Query: 360 taaactcttgagctcaggggctctcattccaaacatctctagccaccactaccatgggag 419
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 taaactcttgagctcaggggctctcattccaaacatctcttgccaccactaccatgggag 620
Query: 420 aac---gaccctgatcttctaaataaaagtttccattttgtgggtccttcaattatagct 476
||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacatggaccctgatcttctgaataaaagtttccattttgtgggtccttcaattatagct 680
Query: 477 atttgctttcccagattccttctgtttcgagagtcacgtgaccaaggatcaggcagagag 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 atttgctttcccagattccttctgtttcgagagtcacgtgaccaaggatcaggcaaagag 740
Query: 537 atgtgcctccactagagttttaatccagagctgttgcaagaggctaggtgaagaggatgg 596
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 atgtgcctccactagagttttaatccggagctgttgcaagaggctaggtgaagaggatgg 800
Query: 597 tgtatttggngtgacagatgggccatgtcaacattgttcctctgaaccagcaaaggctct 656
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtatttggggtgacagatgggccatgtcaacattgttcctctgaaccagcaaaggctct 860
Query: 657 gggaacaggaggaggattca 676
||||||||||||||||||||
Sbjct: 861 gggaacaggaggaggattca 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1080
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1070
Effective search space: 712620
Effective search space used: 712620
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
