Query= MSMg01no168_k21.b1 MSMg01no168_k21.b1 CHROMAT_FILE:
MSMg01no168_k21.b1 PHD_FILE: MSMg01no168_k21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:05 2005
(203 letters)
>mm_chr8_46353622_46354228
Length = 607
Score = 331 bits (171), Expect = 2e-95
Identities = 198/217 (91%), Gaps = 17/217 (7%)
Strand = Plus / Minus
Query: 1 gctttggtctgcaagagctgagctacctggatgagctgtctggagatctctgtagagcag 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gctttagtctgcaagagctgagctacctggatgagctgtctggagatctctgtagagcag 298
Query: 61 aatactagtctctaatttttttaga----ttttttttctagtagctactcagagagaact 116
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 297 aatactagtctctaatttttttagattttttttttttctagtagctactcagagagaact 238
Query: 117 gcttagagaatgaaatgaacattgctattttagttg-------------ttttttttttc 163
|||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 237 gcttagagaatgaaatgaacattgctattttagttgtgttgttttgtttttttttttttc 178
Query: 164 tagaaaatccaagaatattttatagaagcttctctga 200
|||||||||||| ||||||||||||||||||||||||
Sbjct: 177 tagaaaatccaaaaatattttatagaagcttctctga 141
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 607
Length adjustment: 8
Effective length of query: 195
Effective length of database: 599
Effective search space: 116805
Effective search space used: 116805
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no168_k21.g1 MSMg01no168_k21.g1 CHROMAT_FILE:
MSMg01no168_k21.g1 PHD_FILE: MSMg01no168_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:06 2005
(324 letters)
>mm_chr8_46209994_46210720
Length = 727
Score = 584 bits (302), Expect = e-171
Identities = 316/322 (98%), Gaps = 3/322 (0%)
Strand = Plus / Plus
Query: 6 aagattttcgcctccttccaacatccaaactccaaaagaaattcagccttttatttaaaa 65
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 206 aagattttcgcctccttccaacttccaaactccaaaagaaattcagccttttatttaaaa 265
Query: 66 aaaatgacagtttctatgtacaaagctgtcttcttactctgaagatagctaccctgtcac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aaaatgacagtttctatgtacaaagctgtcttcttactctgaagatagctaccctgtcac 325
Query: 126 acagagtaaactcttattactagcctagttcccatctgccaggataatctttgtttacca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acagagtaaactcttattactagcctagttcccatctgccaggataatctttgtttacca 385
Query: 186 agcatcccctcctaaccggtctcc---aacttccttcccagccaggaatccctacccact 242
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 386 agcatcccctcctaacctgtctcctccaacttccttcccagccaggaatccctacccact 445
Query: 243 cttcctttcattagcataaggctgtatagaatctctctcactggccagctgccctgagcc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 cttcctttcattagcataaggctgtatagaatctctctcactggccagctgccctgagcc 505
Query: 303 tgcctctttgtaacagtaagtg 324
|| |||||||||||||||||||
Sbjct: 506 tgtctctttgtaacagtaagtg 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 727
Length adjustment: 9
Effective length of query: 315
Effective length of database: 718
Effective search space: 226170
Effective search space used: 226170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
