Query= MSMg01no169_b17.b1 MSMg01no169_b17.b1 CHROMAT_FILE:
MSMg01no169_b17.b1 PHD_FILE: MSMg01no169_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:43 2005
(315 letters)
>mm_chr8_26216075_26216791
Length = 717
Score = 582 bits (301), Expect = e-171
Identities = 310/313 (99%), Gaps = 2/313 (0%)
Strand = Plus / Plus
Query: 5 gaattctttcaaaggcccagcacatgcaaacaaaacaccaggaatgcccagggttcagag 64
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttcaaaggcccagaacatgcaaacaaaacaccaggaatgcccagggttcagag 264
Query: 65 aaataaaggaagagagggaggaagaaagggagggaagaaggaaggaaagaagcaatccta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaataaaggaagagagggaggaagaaagggagggaagaaggaaggaaagaagcaatccta 324
Query: 125 ctagaataaaaaccattacaaagccatatatataatataaaaatagaaatatggatgatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctagaataaaaaccattacaaagccatatatataatataaaaatagaaatatggatgatt 384
Query: 185 tctttcgaattcttaatcatggtcccttttgggcaagcagaggggccttaatggtagatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tctttcgaattcttaatcatggtcccttttgggcaagcagaggggccttaatggtagatt 444
Query: 245 tagcttttaagacatatattctgcagtgtttagg-tt-tgtgtgtgtgttcatctgtgta 302
|||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 445 tagcttttaagacatatattctgcagtgtttagggttgtgtgtgtgtgttcatctgtgta 504
Query: 303 ttggcacacatgt 315
|||||||||||||
Sbjct: 505 ttggcacacatgt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 717
Length adjustment: 9
Effective length of query: 306
Effective length of database: 708
Effective search space: 216648
Effective search space used: 216648
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_b17.g1 MSMg01no169_b17.g1 CHROMAT_FILE:
MSMg01no169_b17.g1 PHD_FILE: MSMg01no169_b17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:38:43 2005
(282 letters)
>mm_chr8_26319785_26320466
Length = 682
Score = 520 bits (269), Expect = e-152
Identities = 275/277 (99%)
Strand = Plus / Minus
Query: 1 actgtgaattgacctcatgctcatgggaatcctcctgcctcagccctccaagtgctggga 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 566 actgtgaattgacctcatgctcatgggaatcctcctgcctcagctttccaagtgctggga 507
Query: 61 ttacagatagggatctaccaggcttggctgaaatttgaagtttaatcagtctaacacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ttacagatagggatctaccaggcttggctgaaatttgaagtttaatcagtctaacacact 447
Query: 121 gttcctgggttgagcttggctgcatgtggagatgaggaagagagaaactgacgcaaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gttcctgggttgagcttggctgcatgtggagatgaggaagagagaaactgacgcaaatat 387
Query: 181 atatttaactttgggttcttttgaagtccctgctctgaaggttgaaagggtagccaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atatttaactttgggttcttttgaagtccctgctctgaaggttgaaagggtagccaattt 327
Query: 241 aacttttatctctgttctttagcttctctctctctct 277
|||||||||||||||||||||||||||||||||||||
Sbjct: 326 aacttttatctctgttctttagcttctctctctctct 290
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
