Query= MSMg01no170_l11.b1 MSMg01no170_l11.b1 CHROMAT_FILE:
MSMg01no170_l11.b1 PHD_FILE: MSMg01no170_l11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:45 2005
(299 letters)
>mm_chr8_66825520_66826222
Length = 703
Score = 559 bits (289), Expect = e-164
Identities = 295/299 (98%), Gaps = 4/299 (1%)
Strand = Plus / Plus
Query: 5 gaattctgcaaaggaatgcatattaaatttattgtaaatgtctctgaaatagattcataa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcaaaggaatgcatattaaatttattgtaaatgtctctgaaatagattcataa 264
Query: 65 attttaacatatgtgttagttcacaaatacacaccaagtagaaaactatg----aagtca 120
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 attttaacatatgtgttagttcacaaatacacaccaagtagaaaactatggaggaagtca 324
Query: 121 ttgtgtgaagacatctttatcattaaatgactgaagcaactttaaagaaatccaacttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgtgtgaagacatctttatcattaaatgactgaagcaactttaaagaaatccaacttac 384
Query: 181 ctaaagtcaactttagagatagagtcctgagtggaatgggaaataacagggatttacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaaagtcaactttagagatagagtcctgagtggaatgggaaataacagggatttacaat 444
Query: 241 tgtattacagttataattataaataagattgtactcttgtcttccagtcatttgcaatg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgtattacagttataattataaataagattgtactcttgtcttccagtcatttgcaatg 503
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 703
Length adjustment: 9
Effective length of query: 290
Effective length of database: 694
Effective search space: 201260
Effective search space used: 201260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_l11.g1 MSMg01no170_l11.g1 CHROMAT_FILE:
MSMg01no170_l11.g1 PHD_FILE: MSMg01no170_l11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:45 2005
(284 letters)
>mm_chr8_66983059_66983742
Length = 684
Score = 534 bits (276), Expect = e-156
Identities = 282/284 (99%)
Strand = Plus / Minus
Query: 1 aatagaacttttccccctttaagaggctccccttttgttttgcagttttagcttcacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 aatagaacttttccccctttaagaggctccccttttgttttgcagttttagcttcacaga 425
Query: 61 gaattaagtccaacaaacctctacagtgtactgcaattggtattgtgtaggtgcagtcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaattaagtccaacaaacctctacagtgtactgcaattggtattgtgtaggtgcagtcat 365
Query: 121 gggagaagacacgtacacaatgcaaatatttccaagtgtggtaagttctacaatcgaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 gggagaagacacgtacacaatgcaaatatttccaagtgtggtaagttctacaatcgaaga 305
Query: 181 agaaaagagttatggtgcaaagattaagacaatggacttcaaagccagaatgcatggtgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 agaaaagagttatggtgcaaagattaagacaatggacttcaaagccagaatgcatggtgc 245
Query: 241 tcacgtgtgatgttacttagttactgagcaagttagccaagtta 284
|||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 tcacatgtgatgttacttagttactgagtaagttagccaagtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
