TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTATGAATTCTGGTACGTGGCATGGCTCTGCATGCATCCTGTGCCT
TCTGAGATCTCAAAAGACTCACAGCAGCCTCTGCTGATCTGGAGTTGTAA
ATGCTGGCCTTGATGAATGGATGTCTGATAGAAGTGATCAAAACATCGTC
TGACCAAAAGGCAGAAAGCAAGATCAAACTCCCATAATTCAAGCATGACA
AAGAAACCATTGCAAAAGAGATGCACCGTCATCATGCCAGACTCCAAATG
AGTTATTTCTCTCCTGCCCGGGTCTTACCGCAGTTGCCTCCCACTTGGCC
ACAAATGGCAAGCTTTCCTCTACCGCTCAACTGCAACCCCACAGTCTTAT
CAGTGGATCTCCACTCCCTGAAACTGCACACAATGGAGGACGTATTTCCA
GTGCAAAGGAATTGACACCATTACTACTTTAATTAACCAGTTGCCAGTTT
ATACTTTTTCCCTTTTCTCTCCTTTCCCTCGCCACTGTCAGTCCCCCCAT
CTCTCTCTCTCTCTCTCTATCTCTCTCTCTCTCTCTCCCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCACACACACACATAGACACAGACACACACAGACA
CACAGACTCACAGACACACAGACACACAGACACACACACACATCTTTTCA
CACACACACTCATCCACTCTTTATTTCCT

TCATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAGGCAGGGAAATGTGTTAGA
GCTTTAACTATAATGATTCTGCGGCTAATAAGTTGCCACTGGTCATCCCA
GGAGAAAAATAATAGGCTTTGTAATATAAATCTTTACACTGTGTCATAGC
ATCTGTATCTATCCTTTTGCTGTAGCAAAGCATTACTAATTAAAACCAAA
AAGGACATTAACTTTCAAAAAGCAGCTTAAATTTATTGAGACAACTTTGC
AAATCACAGTTAATTGAGTCACAAACTAAACTTCAAATAAAAGAAATAGA
GTGGTAATTGTTTCCCTCATCTTCTACAATACACTTGTTGGCATACATTA
TGGGCTTGCTATCTTTTAACAGTATTAAATCATTGTAGGAGAACATTGCC
AAAAAAAAAATCTCTTCATTTCCTCTTGATGACTTCTTACTACCCTTAGA
GGGAGTTTAATAGAAAAGGAAGGACATGATGTAGTTTTAATGACAGGAAA
CCCATGGCCTTTCAAATGAATAAATTCCATCACTCGCTGCCACAGTGTGC
TAATTATTTCCTTTGATAAATTAAAAGCTGTACAACTCACAAGTGTATAA
GTGTGTGGTTTACAGTTATGATCAACCTGTCTTCATTACTGAAACTTGTA
TTAACGTCATTATTTAGTAAGN

Query= MSMg01no174_k13.b1 MSMg01no174_k13.b1 CHROMAT_FILE:
MSMg01no174_k13.b1 PHD_FILE: MSMg01no174_k13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:34 2005
         (315 letters)



>mm_chr8_59411161_59411875
          Length = 715

 Score =  576 bits (298), Expect = e-169
 Identities = 307/310 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   aattctatgaattctggtacgtggcatggctctgcatgcatcctgtgccttctgagatct 65
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 206 aattctatgaattctggtacgtggcatggctccgcatgcatcctgtgccttctgagatct 265

                                                                       
Query: 66  caaaagactcacagcagcctctgctgatctggagttgtaaatgctggccttgatgaatgg 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caaaagactcacagcagcctctgctgatctggagttgtaaatgctggccttgatgaatgg 325

                                                                       
Query: 126 atgtctgatagaagtgatcaaaacatcgtctgaccaaaaggcagaaagcaagatcaaact 185
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 326 atgtctgatagaagtgatcaaaacatcgtctggccaaaaggcagaaagcaagatcaaact 385

                                                                       
Query: 186 cccataattcaagcatgacaaagaaaccattgcaaaagagatgcaccgtcatcatgccag 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cccataattcaagcatgacaaagaaaccattgcaaaagagatgcaccgtcatcatgccag 445

                                                                       
Query: 246 actccaaatgagttatttctctcctgcccgggtcttaccgcagttgcctcccacttggcc 305
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 446 actccaaatgagttatttctctcctgcccgggtcttactgcagttgcctcccacttggcc 505

                     
Query: 306 acaaatggca 315
           ||||||||||
Sbjct: 506 acaaatggca 515


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space:   216036
Effective search space used:   216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no174_k13.g1 MSMg01no174_k13.g1 CHROMAT_FILE:
MSMg01no174_k13.g1 PHD_FILE: MSMg01no174_k13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:34 2005
         (649 letters)



>mm_chr8_59461014_59462062
          Length = 1049

 Score = 1207 bits (624), Expect = 0.0
 Identities = 642/648 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcagagaggcagggaaatgtgttagagctttaactataatgattctgcggctaataagt 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 848 ttcagagaggcagggaaatgtgttagagctttaactataatgattctgtggctaataagt 789

                                                                       
Query: 61  tgccactggtcatcccaggagaaaaataataggctttgtaatataaatctttacactgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tgccactggtcatcccaggagaaaaataataggctttgtaatataaatctttacactgtg 729

                                                                       
Query: 121 tcatagcatctgtatctatccttttgctgtagcaaagcattactaattaaaaccaaaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 tcatagcatctgtatctatccttttgctgtagcaaagcattactaattaaaaccaaaaag 669

                                                                       
Query: 181 gacattaactttcaaaaagcagcttaaatttattgagacaactttgcaaatcacagttaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 gacattaactttcaaaaagcagcttaaatttattgagacaactttgcaaatcacagttaa 609

                                                                       
Query: 241 ttgagtcacaaactaaacttcaaataaaagaaatagagtggtaattgtttccctcatctt 300
           |||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||
Sbjct: 608 ttgagtcacaaactaaacttcaaataaaagaaatagagtggtaattgggcccctcatctt 549

                                                                       
Query: 301 ctacaatacacttgttggcatacattatgggcttgctatcttttaacagtattaaatcat 360
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctataatacacttgttggcatacattatgggcttgctatcttttaacagtattaaatcat 489

                                                                       
Query: 361 tgtaggagaacattgccaaaaaaaaaatctcttcatttcctcttgatgacttcttactac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tgtaggagaacattgccaaaaaaaaaatctcttcatttcctcttgatgacttcttactac 429

                                                                       
Query: 421 ccttagagggagtttaatagaaaaggaaggacatgatgtagttttaatgacaggaaaccc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ccttagagggagtttaatagaaaaggaaggacatgatgtagttttaatgacaggaaaccc 369

                                                                       
Query: 481 atggcctttcaaatgaataaattccatcactcgctgccacagtgtgctaattatttcctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 atggcctttcaaatgaataaattccatcactcgctgccacagtgtgctaattatttcctt 309

                                                                       
Query: 541 tgataaattaaaagctgtacaactcacaagtgtataagtgtgtggtttacagttatgatc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tgataaattaaaagctgtacaactcacaagtgtataagtgtgtggtttacagttatgatc 249

                                                           
Query: 601 aacctgtcttcattactgaaacttgtattaacgtcattatttagtaag 648
           |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 248 aacctgtcttcattactgaaacttgtattaacttcattatttagtaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space:   663921
Effective search space used:   663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)