Query= MSMg01no175_f21.b1 MSMg01no175_f21.b1 CHROMAT_FILE:
MSMg01no175_f21.b1 PHD_FILE: MSMg01no175_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:26 2005
(569 letters)
>mm_chr8_90946930_90947898
Length = 969
Score = 1085 bits (561), Expect = 0.0
Identities = 567/569 (99%)
Strand = Plus / Minus
Query: 1 cagatatgaaggttagcatccccagtaagatgaagtcaaagccaccccaacttcagtgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 cagatatgaaggttagcatccccagtaagatgaagtcaaagccaccccaacttcagtgtg 892
Query: 61 gcctcttactcattttcacacgggctcctgcaatttgccgtatagcccagttcagcctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gcctcttactcattttcacacgggctcctgcaatttgccgtatagcccagttcagcctca 832
Query: 121 aactcatgatccccctgcctcagcctccaagtgctgggatgaatacaggcatgagctacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aactcatgatccccctgcctcagcctccaagtgctgggatgaatacaggcatgagctacc 772
Query: 181 acaacttagtagatgtttctcagagcccctgtgtcatccacaggaccctccagcatgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 771 acaacttagtagatgtttctcagagcccctgtgtcatccacaggaccctccagcaggcag 712
Query: 241 atcccagaatgaagttctaagccaggacatcaaaatccagagccacctctcccacagcca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 711 atcccagaatgaagttctaagccaggacatcaaaatccagagccacctctccaacagcca 652
Query: 301 gtgaccttggccaggtgacagtcttgacaagatggctatgggctcaggtaacccacccaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gtgaccttggccaggtgacagtcttgacaagatggctatgggctcaggtaacccacccaa 592
Query: 361 gccagatagcagccagaatggtagaggctcctgctttgctttgctccgtctggttccact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 gccagatagcagccagaatggtagaggctcctgctttgctttgctccgtctggttccact 532
Query: 421 tggcagagcctgccaggaatggtgctttttctacataatggttaaaattcttagcagtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 tggcagagcctgccaggaatggtgctttttctacataatggttaaaattcttagcagtat 472
Query: 481 tattctctgctttccttggcagccaacagaacatacttctgatgtggcaggtaaccggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tattctctgctttccttggcagccaacagaacatacttctgatgtggcaggtaaccggag 412
Query: 541 agggccttggtctcaacaatttgctgaac 569
|||||||||||||||||||||||||||||
Sbjct: 411 agggccttggtctcaacaatttgctgaac 383
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 969
Length adjustment: 10
Effective length of query: 559
Effective length of database: 959
Effective search space: 536081
Effective search space used: 536081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no175_f21.g1 MSMg01no175_f21.g1 CHROMAT_FILE:
MSMg01no175_f21.g1 PHD_FILE: MSMg01no175_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:26 2005
(271 letters)
>mm_chr8_90789444_90790114
Length = 671
Score = 472 bits (244), Expect = e-137
Identities = 267/280 (95%), Gaps = 9/280 (3%)
Strand = Plus / Plus
Query: 1 cacagtcttctggtgcacaacagtgtttgaaagctgttctcctcaggccacattcttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 cacagtcttctggtgcacaacagtgtttgaaagctgttctcctcaggccacattcttgag 251
Query: 61 tcttgcggcttgagtctttgctggcattccatagtgagccagtctgggttgaccagctta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tcttgcggcttgagtctttgctggcattccatagtgagccagtctgggttgaccagctta 311
Query: 121 actaagagatgcaagattt---------aattgggaacattttgccttttaagtaaaatg 171
||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 312 actaagagatgcaagatttttggcttttaattgggaacattttgccttttaagtaaaatg 371
Query: 172 ttttaaattccttgtttgtctaaaaagaccattttaaaaccaaggaactaggaatctgaa 231
||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 372 ttttaaattccttgtttgtctaagaagaccattttaaaaccaaggaactagggatctgaa 431
Query: 232 ataacccacctgggtaaaatacacactctgtgtgtgtgtg 271
|||||||||||| |||||| ||||||||||||||||||||
Sbjct: 432 ataacccacctgtgtaaaacacacactctgtgtgtgtgtg 471
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 671
Length adjustment: 9
Effective length of query: 262
Effective length of database: 662
Effective search space: 173444
Effective search space used: 173444
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
