BAC end | BAC-end 1 | BAC-end 2 |
---|
end name | MSMg01-176F12.T7 (MSMg01no176_f12.b1) | MSMg01-176F12.TJ (MSMg01no176_f12.g1) |
ACC | AG371068 | AG371069 |
length | 1,292 | 1,291 |
length of high quality (start - end) | 322 (126 - 447) | 269 (130 - 398) |
definition | CHROMAT_FILE: MSMg01no176_f12.b1 PHD_FILE: MSMg01no176_f12.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:47:59 2005 | CHROMAT_FILE: MSMg01no176_f12.g1 PHD_FILE: MSMg01no176_f12.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 19:47:59 2005 |
singlet/doublet | --- | singlet |
---|
BLAST hit | no hit data | unique |
---|
sequence | NNGGACTATGGGCGCTATAGACTCCTATAGGGAGAGGATCCGCGGAATTC
ATTGGCCCATCCTGCATTTTATATGGACCTTTTAGTACACCATGCACTGG
TCATTTGGCAAATACGGGCTTCTCATATCATAGGAATACTTTTCAAGTCA
TTCCACATTGCATTAATATCTATTTTTTTAATCTGTTAATGCCACCAGTC
TCATCTCCCAAATATTTGAGTTTTCAAAAGCGATGGTGCTCCCAGTTGCA
AAATATAAAATTTCCCAAAATTCGACTTGTCTCTTGAAGGTTGGGCTCTC
ACCATGGGCAACGGATGGCATCAGTTGTTTTCCTGAAATGACGGGCTCGT
TTATTCTTTTCCCAGAAACTGTCTGCCAAACACCCAAGTCTGAAGAGTTT
TTTTTTGTCTGTCAGTTGCTCTTCCAAGTGAAAATGGTGTTCCGTAAATT
TTTTTTTTTTCCCCCCCCCCAGNTCAGCCACACCCTAACAAAAAAAAAGA
GGCCAGTCACCACGCTACACTCTGCACAGGAGAGTTTTCTGTATGTGTTC
ATCTTATCGGATCTCAAATATTAAAAGATGTGAACACAGAGGTTGAGATT
TGATGGCATTTATCATTGTTACTACTTCATCCAGGGCGTTCTAAAGAGCG
ATTGCTTCTGTTTCTTTTTCTTTTTAATTGTGATCTTGGCATGCTTGAAT
GACAAGGTACCTGTTTATATGCTTGTCCACAGCTGCTGCTAAGCCTTATG
AGTTACCATCAGGGTGACTCACTGTGTCTTTTGTACTATCAAAGTATCAG
CTATGAGCTGCTGACATATTCAACCACATCTTTATTTGCTAAAAAAAAAA
TAAAAATTTGTACCTCAAAAGACCCCTGAAATAATCCTATGAACCTTTTA
AATGGTTTATGTATCCCCTTTATTTAATTCTCATAAACTGTCATTATTCT
CCATCTCACCCGATGTTGATTTCGTTTTATTATTCCTATTTGCTTCCGGA
TTTGTTTTATCTCTTTAACAAACTATATTTTTGTTCATATATTTACTCTC
TCCTATATTATTTAATTTTTATTTCTAAAATTGAATCTTAATCTCTTCTC
TCTCCCTTTATTGTCCTTGCTCTACTCTTTATTTCTTTTTCTCCTTTCTT
AAATATTTTTTTTATTTTCTATCTCACTTTCTATATCTTTATTTTCTCAT
TCTCTATCTCTATTTATTATCTTATTATATCTTACTTTTTTCTCCTATAT
TTTTTTAATTCTTCTCTATCTGTACTATTTCATTTCAATCCA
| TTTTTCCTCATGGAGCCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCCCCTAAGACCCCCTTCCTGTTGAGAGGTGGCAT
CTCTGAGCCTTTAAACATTCCGGTGCTGNATGAGAATGCAGCAGTAGCAG
TGTGCTGGTTTTTGTTTCTAGTCTCTTGAATCACCTCTCCCAGGAGCTCA
AGTCTCCTCCCCGTGGACAGGCCAGAAAAGAGGGGTTCCTCACCGACTGG
TCCACCTTTCCAGTGACTCTCCAGACAAGAGAATGAAGAGAATGTATTGG
TGGTAGATCTCTCAGGCCCAGCTGCCCCCACCAAAAGCCACATGTGTCAT
ATACAAACTGTCTAGCTGAGCCCCTTTCAGATTTTCAGTCAAACAAAACG
TTTTATTAAAATGATTATCTGAAGCTCTGAATTGTTTGGGACACTTGCTT
ACCCATCAGATGCCCACTGATGACCTATCTGCCAGGTATGGGTCCTCTCT
GGATTCAAGTGCTGGCTCTGAAACCAGACTCCCTGGGTTTGAATCTTTCC
TTGACGACTTAGAAGACACATGACCAGACAACATACTTGTAATCTCTCTA
AATATAGTACGGAGTAGCAGGAAGAACTAAGCATCTTGATTTAGGTGATG
GGTAAATTCCTTAAATCAGTTCTCAGTGTTCTAACCAAGAACTTCTGAAG
ACCTACTGTGTGCCAAGTATCAGGCTACAGAGAAATGTCTATAATATTGG
CAAAATAAGCCTCCCTCTCAGGGAGCTACTTTCCAGTTATTCTCTCCATA
TATTAATTTTGAAATGTTTTCAAATCCTTTTATAAGATCACGTGTGTGTG
TGTGTGTTTTTTTACTCTTTTTTTCCTTCTCTTCCTCTCTACTTTCCTAT
CCTTTTTTTCTTTTTCTCCCTTTTTTCTTCTTCTATTTTATCTTTTTGTC
TTCTTTCCACTCTTTCCTCTCTCTCTCTCCTTTCTCTCTCTTTTCTTTTT
CTTTATCTTTTCTTCACTCCTCCTTCTTCTTTCTCTTTTTCCCTTTCTCA
CTCCTTCTTCTTTTTCTATTTCTCTCTTTTTTTCCTCTTTTCTTTTATCT
TTTTTTTCCTCTCTCTTCTCTTGCTCTATCATCTTTCTATCTTCTTCCAC
TCTTCTTTCCTATTATGTCTCTCCCCCTCCTTCCTCTATCTCTCCTCTCT
CTCTTTCTTTCGCTATCCCCTCTGATCTCTATCTTCCCTCTTCTTTTTTA
CTCCTCCCTCTGTCTTTGTCCTTTCTCTGTTTCATCTTATT
|
quality values | Open.Hide. 0 0 3 6 6 6 6 7 6 6 10 10 16 14 13 8 8 8 8 8 8 9 9 8 8 13 15 17 17 26 28 36 32 35 32 36 36 36 39 39 37 31 37 37 37 42 43 29 33 28
28 23 23 24 20 19 15 26 24 30 35 31 29 28 25 28 28 26 17 13 8 8 8 11 8 11 12 12 26 28 33 33 28 20 20 20 33 33 35 42 30 29 29 28 34 42 42 42 33 33
33 39 43 43 43 42 37 25 24 21 24 28 36 28 18 18 15 21 30 26 21 17 11 10 10 19 20 30 40 57 57 44 40 28 32 37 42 57 57 57 57 57 57 48 44 44 39 57 42 42
42 47 47 48 48 48 50 50 43 37 37 43 43 57 50 50 50 50 50 50 50 50 50 50 68 68 57 57 57 57 50 37 35 43 32 43 43 44 44 52 43 43 50 50 57 57 57 57 52 52
57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 43 39 41 57 57 68 68 57 57 57 45 45 45 59 57 57 57 52 52 52 57 57 57 57 43 43 57 57 52 52 52 52
52 57 57 57 57 57 52 57 57 57 57 57 57 57 57 57 57 57 52 57 57 57 52 52 52 57 57 57 52 52 52 57 57 57 57 50 50 37 37 37 43 43 43 38 38 43 43 44 50 52
57 52 52 50 44 43 23 23 23 28 43 43 43 43 50 43 43 35 35 35 42 47 44 42 42 35 42 42 57 59 57 54 54 47 47 47 47 57 57 57 57 42 37 30 30 30 39 44 46 48
43 44 43 48 54 57 59 59 46 43 43 32 32 32 43 43 28 28 39 43 42 36 33 40 30 30 30 34 32 35 37 39 43 43 39 39 37 39 43 47 48 39 39 39 36 20 19 11 11 11
11 14 18 28 25 28 28 28 34 34 47 43 43 37 37 43 43 59 57 57 57 48 48 57 47 43 39 39 37 43 43 43 43 48 26 19 10 10 10 19 24 37 37 30 28 28 20 18 8 8
8 10 10 12 26 26 21 9 8 8 10 14 9 21 21 16 16 11 11 12 23 3 0 3 25 22 19 11 18 16 10 9 8 8 8 8 9 8 10 9 11 12 12 16 15 8 8 8 8 8
8 8 9 12 22 12 14 26 26 37 39 47 48 48 43 47 39 39 39 43 47 59 47 36 36 33 36 28 21 21 29 29 32 32 32 32 41 41 46 42 39 35 28 40 28 24 18 18 18 36
36 24 21 9 9 9 21 21 57 54 47 44 47 43 42 35 42 42 44 37 44 36 23 23 23 36 38 47 57 57 47 47 47 47 32 32 20 15 15 15 15 18 38 32 32 20 27 27 33 33
39 50 43 43 24 24 11 11 16 28 38 43 44 28 23 23 28 36 42 43 36 36 23 20 20 27 27 32 32 23 31 23 18 14 17 21 16 19 19 12 13 15 16 24 19 36 23 23 23 33
29 36 36 39 39 43 43 36 43 36 36 36 33 33 34 34 34 43 36 36 43 31 36 20 23 19 24 24 24 24 19 17 13 13 10 10 10 8 8 8 8 10 17 19 28 22 13 13 10 10
10 11 11 10 8 8 12 11 12 11 11 13 12 10 14 11 15 10 13 12 15 8 8 8 10 8 9 8 10 8 8 8 10 10 10 10 15 10 11 10 10 11 12 12 14 22 26 37 28 22
12 11 11 21 23 20 18 14 11 11 8 8 8 8 8 9 10 9 9 9 10 10 15 16 13 11 11 13 17 10 10 11 17 17 21 15 15 12 12 8 8 11 11 11 8 8 8 8 8 8
9 9 10 9 9 8 8 6 6 8 10 15 15 8 8 8 8 8 8 9 9 8 8 9 9 10 8 10 10 16 16 12 8 8 8 8 8 8 10 9 12 15 15 14 15 15 13 10 10 10
10 9 9 9 9 9 9 10 15 15 9 9 9 9 9 9 11 11 8 8 8 8 9 15 10 11 11 13 17 17 10 10 9 8 8 8 8 8 8 8 8 13 12 12 10 10 8 8 8 8
8 10 10 9 8 10 8 8 8 8 8 8 8 9 8 6 8 8 8 8 8 9 13 10 10 10 8 12 9 10 8 8 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 8 9 9
8 8 8 8 8 8 10 9 8 8 8 8 8 8 8 8 8 8 8 8 8 6 7 7 10 10 10 8 9 9 10 9 9 10 10 9 9 10 10 10 10 9 8 8 12 8 8 8 8 8
10 11 9 9 10 12 17 12 8 8 8 8 8 8 15 11 11 11 11 11 11 16 11 8 8 6 6 8 8 10 10 9 9 9 10 10 10 10 9 10 10 10 10 10 8 8 8 8 8 9
9 7 7 8 8 8 8 8 8 8 8 8 8 8 8 9 11 11 10 8 8 8 10 8 9 10 9 9 9 10 10 9 8 8 6 6 6 8 8 8 8 6 6 8 8 9 10 10 10 12
10 10 8 12 8 8 8 8 9 9 9 9 9 6 8 8 8 8 8 8 8 8 8 8 6 6 8 8 12 8 8 8 8 8 8 8 11 10 12 8 10 10 10 10 12 13 13 10 9 9
9 9 9 10 11 9 9 9 10 10 10 10 8 8 8 10 10 8 7 6 8 8 15 11 9 9 10 10 8 8 9 8 8 10 10 10 8 8 8 8 10 15 8 8 6 6 8 8 8 7
7 6 6 6 8 8 9 10 10 8 8 6 6 8 8 6 6 10 12 14 20 17 11 8 10 9 8 8 6 6 6 10 8 10 10 10 18 15 11 10 10 10 10 8 8 6 6 8 8 8
10 9 12 8 11 8 8 8 10 10 9 9 10 10 8 8 8 6 6 6 6 6 6 8 6 6 8 8 8 8 8 8 8 8 8 7 6 8 8 12 12 12 | Open.Hide. 7 7 7 7 6 8 7 7 9 7 7 8 10 10 10 8 9 9 9 12 9 12 14 15 12 10 9 9 9 11 19 19 19 8 9 10 19 21 19 9 9 14 23 29 36 36 36 36 36 33
33 33 33 33 41 39 27 27 3 0 0 3 0 3 8 8 8 8 8 11 12 12 11 11 11 15 13 15 17 17 17 12 21 21 29 28 29 28 30 47 47 48 50 50 50 50 53 53 33 33
33 33 33 27 23 10 8 7 7 8 8 9 9 9 9 10 10 10 16 11 12 13 16 19 28 21 23 3 0 3 25 25 39 41 47 50 50 59 59 59 59 39 33 34 36 34 34 39 43 43
48 48 48 48 48 48 48 57 48 54 48 54 54 54 54 54 50 54 50 50 50 47 57 48 48 54 59 59 59 43 44 43 39 39 57 57 68 68 68 57 57 57 57 57 43 43 41 57 57 47
57 57 44 44 57 57 57 57 57 57 57 57 50 57 57 57 37 50 50 44 43 32 32 23 43 43 57 57 57 57 59 59 41 41 39 43 50 59 59 59 59 57 57 54 54 54 57 57 54 54
54 54 57 57 57 57 57 57 57 57 52 52 57 57 57 57 57 57 57 57 57 57 52 52 52 52 52 43 43 38 38 27 43 43 41 41 43 42 41 43 43 57 50 52 52 52 43 44 43 52
52 57 57 57 57 57 57 57 57 57 57 57 57 50 57 57 57 47 57 47 57 48 59 42 41 41 32 28 23 23 28 31 42 47 57 57 54 48 48 48 48 48 57 57 59 59 54 54 57 59
59 57 57 54 48 48 48 48 48 59 54 48 48 48 48 48 43 43 43 42 35 39 43 48 48 59 40 40 35 35 35 43 37 57 47 43 40 41 39 39 39 39 59 47 47 29 24 12 11 11
11 15 15 9 8 8 8 8 24 24 59 47 59 57 59 59 59 59 57 57 57 59 59 57 57 59 48 48 48 48 48 48 59 57 57 57 39 39 30 32 32 59 59 59 59 43 43 39 36 39
34 31 23 15 12 11 12 11 11 12 13 11 11 11 11 11 12 25 25 37 34 43 41 41 43 59 59 48 48 47 47 37 32 28 37 37 43 40 40 31 23 20 20 32 32 47 54 54 47 47
48 48 54 43 42 35 35 35 44 44 57 57 44 41 30 30 30 44 44 57 43 43 47 44 48 44 44 23 36 36 57 57 57 57 44 44 47 47 57 47 47 54 57 57 59 59 59 59 48 48
47 57 44 50 37 37 43 57 38 38 32 32 12 24 19 29 35 42 43 43 50 57 50 44 43 35 35 43 43 50 43 43 43 48 57 57 57 57 48 48 57 57 44 47 48 48 48 59 57 48
48 48 57 44 44 32 32 30 32 42 37 39 30 21 21 13 13 17 24 24 20 28 20 23 23 40 40 32 32 20 20 20 31 32 47 43 48 48 48 48 34 32 32 20 20 19 21 24 21 19
12 17 19 32 32 37 39 40 39 39 30 30 26 26 28 29 31 20 15 24 23 26 26 30 28 28 14 15 21 25 37 37 39 34 33 28 28 28 19 15 14 15 21 23 32 28 24 21 15 12
9 15 14 24 14 18 23 25 25 23 17 10 10 10 10 11 15 12 17 18 16 11 10 10 16 17 20 15 15 21 14 12 12 11 10 10 10 9 9 16 18 23 23 17 17 17 27 27 37 35
22 26 18 24 24 24 21 14 12 11 16 18 23 28 22 18 15 13 13 13 11 14 12 10 8 8 10 8 8 12 21 21 20 12 12 8 19 15 15 13 9 13 13 21 17 16 11 14 14 10
15 15 10 10 8 17 19 30 18 20 17 17 11 10 13 13 11 9 9 9 9 12 14 10 10 10 11 15 17 19 11 11 11 11 9 8 8 8 8 11 8 8 8 10 12 12 13 15 13 10
10 9 17 11 10 10 10 13 18 16 11 10 9 8 8 7 6 8 8 10 10 8 8 8 8 8 8 8 10 10 8 8 8 9 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 10
10 10 12 11 12 11 11 8 8 8 8 12 8 8 8 8 8 8 8 8 8 8 11 9 8 8 8 8 10 16 13 10 10 10 10 8 8 8 6 6 8 8 10 11 10 10 7 6 8 10
10 8 8 8 8 8 9 8 8 9 9 9 9 12 11 10 8 8 12 10 10 8 8 8 9 9 9 6 6 8 10 8 10 10 14 15 10 10 8 8 8 8 8 8 12 15 15 10 10 9
11 10 10 9 9 9 12 10 10 10 11 11 8 8 6 6 6 6 8 8 6 6 8 8 18 15 10 9 9 8 9 9 8 8 13 12 14 10 10 10 8 8 8 8 11 8 8 8 8 8
8 8 8 8 8 8 6 7 8 7 11 10 12 8 8 8 8 6 6 8 8 8 8 6 6 6 8 8 9 11 15 15 10 8 8 8 12 12 8 8 10 10 12 12 18 8 8 8 8 8
8 10 10 12 16 15 11 10 10 10 11 9 9 10 10 10 8 10 8 8 8 9 9 9 8 10 8 8 8 8 8 8 8 8 8 9 8 8 8 12 12 8 8 10 10 13 11 8 8 8
10 13 13 12 10 8 8 7 7 8 8 11 11 12 12 9 9 9 10 8 8 8 8 8 8 8 9 10 12 7 6 8 8 9 10 9 9 9 9 8 8 12 8 8 8 10 10 8 8 8
6 6 8 8 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 9 11 11 13 11 11 10 8 8 10 10 10 8 8 6 7 10 12 12 9 9 10 9 8 12 11 8
8 8 8 8 8 8 8 8 8 8 6 6 6 10 9 9 9 8 8 8 8 8 12 10 7 7 8 6 6 6 7 7 6 6 6 6 8 6 6 8 6 |