Query= MSMg01no176_h22.b1 MSMg01no176_h22.b1 CHROMAT_FILE:
MSMg01no176_h22.b1 PHD_FILE: MSMg01no176_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:19 2005
(406 letters)
>mm_chr8_109821374_109822179
Length = 806
Score = 719 bits (372), Expect = 0.0
Identities = 394/408 (96%), Gaps = 12/408 (2%)
Strand = Plus / Minus
Query: 5 gaattctaaaacagctagggctacacagagaaacctgtctcaaaaacaacacaaacagaa 64
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 497 gaattctaaaacagctagggctacacagagaaacctgtctcaaaaacaaaacaaacagaa 438
Query: 65 aaagcctacctccttaaacaattaaactttcatcctgccttataatctttctgattatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaagcctacctccttaaacaattaaactttcatcctgccttataatctttctgattatga 378
Query: 125 tactccccaggcttgctgaccagaaaagatagggcagtgaagacatatatggtctcatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tactccccaggcttgctgaccagaaaagatagggcagtgaagacatatatggtctcatat 318
Query: 185 catcataaacaataataagaataaagcctaaaaatcttcttcattaagaaacacttctac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 catcataaacaataataagaataaagcctaaaaatcttcttcattaagaaacacttctac 258
Query: 245 atgcctttaatccagcacttgggagacagaggctggtggatctctatgagtttgaggcta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 atgcctttaatccagcacttgggagacagaggctggtggatctctatgagtttgaggcta 198
Query: 305 gctcagtctacagagtgagttctaggacagccaggactacataataaaactgtctctttt 364
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 197 gctcagtctacagagtgagttctaggacagccagggctacataataaaactgtctc---- 142
Query: 365 ttaa------caaaacaaaaaacacacaaacaacaacaaaaatactag 406
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 141 --aaacaaaacaaaacaaaaaacacacaaacaacaacaaaaatactag 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 406
Length of database: 806
Length adjustment: 9
Effective length of query: 397
Effective length of database: 797
Effective search space: 316409
Effective search space used: 316409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no176_h22.g1 MSMg01no176_h22.g1 CHROMAT_FILE:
MSMg01no176_h22.g1 PHD_FILE: MSMg01no176_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:48:19 2005
(204 letters)
>mm_chr8_109682335_109682938
Length = 604
Score = 387 bits (200), Expect = e-112
Identities = 203/204 (99%)
Strand = Plus / Plus
Query: 1 ctcttactagtttgtgtggtagcttacatgaggtttaaatgcatgccggctgcgtgtctc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcttactagcttgtgtggtagcttacatgaggtttaaatgcatgccggctgcgtgtctc 260
Query: 61 ttatctgtaatccctgtacctattaagctgagttggggagatcttgaattgggaactgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatctgtaatccctgtacctattaagctgagttggggagatcttgaattgggaactgcc 320
Query: 121 tgagctacaataaaaccccaaaaacaaacacacaagaagtttgtatgcaaagcaggcgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgagctacaataaaaccccaaaaacaaacacacaagaagtttgtatgcaaagcaggcgct 380
Query: 181 aaggctcgtgggctctgtgtttta 204
||||||||||||||||||||||||
Sbjct: 381 aaggctcgtgggctctgtgtttta 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
