CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAGAATGCTCTGACTTCCCTCTCTGGCACCATCCCTGTGCTTTGCAG
TTTTCTGCCAACTGGAACAGTGTGCGAATCTTTATAGAGTTTGCATTTTA
AATAAGGGTGTGGATTATAGTTGAATGTTTAATATTCATACACAGGCATT
TAGGAGCTATGCCTGTTTTAATATTTCACAAATTTCTCCTCTGGTTCAGT
GAATATATTTTCCTCTCTTGCTCTTGATGTCTTCCCTCCCTAGTCACACT
CATTATGAAATTCATGGGTTGCTGTGGAAACGGTGATGTTGAGTGTGGGT
GGAGCTCCCCAAAAGAGTTCCTAGGAAGCAGGGACACCTTGGATGCTGGA
ATGGAATGGCTGATTAGCCAGAACTTTTGGCTTCTGTGGAACATATCGCC
ACAGTGCATGTGGTAGTCAGGCGCACAGGGTTTGCTGAGGGTTGTTATAT
AGCAAGCAAATTGTTTCATTTCAGATAGACTCTGTATGCGGTGTGTGCTC
CTAGAGCCAGATAAGATCACACAAAACAGCAGCAGCAACCCTCACACAAG
ATTGGGCTTTGCGGAGAAATTTTGGTGTTGGAGTGGAAGCAAGATTTTCC
AACATATCACCATGACCTATGCACATACAGTTGTATCAGACGGCTGTGGT
CACACAGTCACTTTGTCGTGCGTTGCAACAGCACATGTTGTTAGGTAACT
TTAC

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAGGGGAACCCTGGGAAGTGCATGGGA
ATTCCAGGGGAACCCTGGGAAGTGCATGGGAATTCCAGAGGAACCCTGGG
AAGTGCATGGGAATTCCAGGGGAACCCTGGGAAGTGCATGGGAATTCCAG
GGGAACCCTGGGAAGTGCATGGGAATTCCAGGGGAACCCTGGGAAGTGCA
TGGGAATTCTAGAGGACCTTTTCTAGCCTTCATGTTTATTAGGCCTGGGA
AATACCCACAGTGTTTTCATTTGAGTAAATCCTTGAATCAACATTGTGGT
GTTTTCCTCAAAGGAACTAATTGCTACACCACATACTGGCTCTGTCCTTC
CAGCCTAGTTCTGGTCACTTAGTGGAAAAGAGAACATTTTTCTTGATTCT
CAAACAAGTAAGAATTGATTACATATACATGGAAATTGTGCGTCCAAAGC
TCACATTGTTTGCTGGCTCCCAGGACACATGTCCACAGCTCCCAGGACAC
ACACACAGATGCCCACAGCTCCCAGGACACACACACACATGTCCACAGCT
CCCAGGACACACACACACACACACACATGTCCACAGCTCCCAGGACTGAC
ACACACACATGTCCACAGCTCCCAGGACACACACACAGATGCCCACAGCT
CCCAGGACACGCACACACATGTCCACAGCTCCCAGGACACACACACAGAT
GCCC

Query= MSMg01no179_c22.b1 MSMg01no179_c22.b1 CHROMAT_FILE:
MSMg01no179_c22.b1 PHD_FILE: MSMg01no179_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:08 2005
         (616 letters)



>mm_chr8_79780053_79781068
          Length = 1016

 Score = 1160 bits (600), Expect = 0.0
 Identities = 609/612 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagaatgctctgacttccctctctggcaccatccctgtgctttgcagttttctgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 gaattcagaatgctctgacttccctctctggcaccatccctgtgctttgcagttttctgc 757

                                                                       
Query: 65  caactggaacagtgtgcgaatctttatagagtttgcattttaaataagggtgtggattat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 caactggaacagtgtgcgaatctttatagagtttgcattttaaataagggtgtggattat 697

                                                                       
Query: 125 agttgaatgtttaatattcatacacaggcatttaggagctatgcctgttttaatatttca 184
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 696 agttgaatgtttaatattcatacacagacatttaggagctatgcctgttttaatatttca 637

                                                                       
Query: 185 caaatttctcctctggttcagtgaatatattttcctctcttgctcttgatgtcttccctc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 caaatttctcctctggttcagtgaatatattttcctctcttgctcttgatgtcttccctc 577

                                                                       
Query: 245 cctagtcacactcattatgaaattcatgggttgctgtggaaacggtgatgttgagtgtgg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cctagtcacactcattatgaaattcatgggttgctgtggaaacggtgatgttgagtgtgg 517

                                                                       
Query: 305 gtggagctccccaaaagagttcctaggaagcagggacaccttggatgctggaatggaatg 364
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 516 gtggagctccccaaaagagttcctaggaagcagggaaaccttggatgctggaatggaatg 457

                                                                       
Query: 365 gctgattagccagaacttttggcttctgtggaacatatcgccacagtgcatgtggtagtc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gctgattagccagaacttttggcttctgtggaacatatcgccacagtgcatgtggtagtc 397

                                                                       
Query: 425 aggcgcacagggtttgctgagggttgttatatagcaagcaaattgtttcatttcagatag 484
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 aggcgcacaggatttgctgagggttgttatatagcaagcaaattgtttcatttcagatag 337

                                                                       
Query: 485 actctgtatgcggtgtgtgctcctagagccagataagatcacacaaaacagcagcagcaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 actctgtatgcggtgtgtgctcctagagccagataagatcacacaaaacagcagcagcaa 277

                                                                       
Query: 545 ccctcacacaagattgggctttgcggagaaattttggtgttggagtggaagcaagatttt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ccctcacacaagattgggctttgcggagaaattttggtgttggagtggaagcaagatttt 217

                       
Query: 605 ccaacatatcac 616
           ||||||||||||
Sbjct: 216 ccaacatatcac 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)