XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTT
CTTGGACTGAAAAACCCTTGTGCTCCACTTGCTCATCCCATGGCTCATCC
TCCACCTGGGTGACCATGAGCATTTTTCTGTCATATCCTTAGCTCTGCCT
TCTCCACACTGTGGTGTGGCTGGAATCCTCCTGCAGGGCCTGCAGACTGG
CCTCTAGGTCTTAGAAACAGGCTCAATGTGTGCACATCTCCGACACAACT
CATGCCTCAACACTCATTTCTTTCACTCTGGCGCAGCATGTTGCTCTCTG
CTCCTGATACTGCTGCAAGTCTCCCAAGGGACACACAGGCACAGAGGATT
TTTATTATAATCAACTCTCTAGAGTCTCACCTTATTTAATTAACCCCCCC
TTCCCTGCACACAACTGACCTGCTGGAGAGTGACCCTGTATTCAGGGTGG
CTCACAAACTTTCCAGCTTTCCCCAGTTCCCCCCAATTCAGGATCTCTGT
TCCCTCACTAACTTTAAGAGACAAAAAGGTCTCCAGAGCAGAAGCCCACA
TCCTGGCGCCCCCAAAGGTCTCTTGGTTGAGCCACCATGGTCACCAACAT
CATCACCTTGCCGACTCCAAATACATTTCTATAGTGTTGTGCTCTGTGTT
CAAGGACCACTTGGGCCAGTTGCAGTCCCACACATCATGATGCTAACACC
CATTGAGAAAATTACTTACATTGATCT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTGCCGAGCAGACCGTTACGTGGCTCATCACCC
TGGGCGTGCTGTAGCCGCCCAAGAAAACCATCTCGGACCCTGAGGTCTTC
TTGCAGGCGTCGCTCAAGGACGGGGTGGTCCTATGCCGGCTGCTGGAGCG
CCTGCTGCCCGGGACCATCGAGAAAGTAAGTGGCCATGGCTCGGTCTTCG
GCTGTATCCCCGATCCGTCCGCCAGTTTTACCGAGTGCTAATATCAGTTT
CCCCCCAACCATTTTTTTTTTCCCCCTTTTTCTTTTTATCTTTAGCCGCC
AATTTTTAATAGTTTCCCCCCCCCCCCCCCAATATAGAAGTATTTTTATG
GCTATGCCCCTTTTTCCCCCCCCCCCTCATAAAAAAAAAAAATTTTTCTC
CGGCGGGTGTCTCTTTACTCTTCTTCATTAATCCCTGATTCCTCAACCCC
TCATTTTCCTTCTTCTTCCCCTATCTCTTTTTTCTTTCATATTTATTTAC
TACATTTTATAGCTCCTCTTTTCTCCTCCTCCTATGGCACATCGCTTTTA
TTTCCTTTCCCACTTTTCTTTCATTTATCTTCTCTCACCTTAACACTTTT
TTTTCCCCTCCTCTCCCGGTCCCGTTTTTGCATTCATCTCCCCTTTTTTT
TTGATCTTTCCCTCCCTCCGTCTATCAATTCCTCATTTTAGTATTTCATT
TCCTTATCTCCACCTCTCCCCCACTTTTTTTTTGTTCCCTGCTCTTTTTC
TCCCCCCCTATTTCTATTTCTCTCTCTTCCT

Query= MSMg01no179_n06.b1 MSMg01no179_n06.b1 CHROMAT_FILE:
MSMg01no179_n06.b1 PHD_FILE: MSMg01no179_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:56 2005
         (318 letters)



>mm_chr8_11897767_11898484
          Length = 718

 Score =  590 bits (305), Expect = e-173
 Identities = 311/313 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctttcttggactgaaaaacccttgtgctccacttgctcatcccatggctcatcc 63
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggaattctttcatggactgaaaaacccttgtgctccacttgctcatcccatggctcatcc 622

                                                                       
Query: 64  tccacctgggtgaccatgagcatttttctgtcatatccttagctctgccttctccacact 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccacctgggtgaccatgagcatttttctgtcatatccttagctctgccttctccacact 562

                                                                       
Query: 124 gtggtgtggctggaatcctcctgcagggcctgcagactggcctctaggtcttagaaacag 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtggtgtggctggaatcctcctgcagggcctgcagactggcctctaggtcttagaaacag 502

                                                                       
Query: 184 gctcaatgtgtgcacatctccgacacaactcatgcctcaacactcatttctttcactctg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctcaatgtgtgcacatctccgacacaactcatgcctcaacactcatttctttcactctg 442

                                                                       
Query: 244 gcgcagcatgttgctctctgctcctgatactgctgcaagtctcccaagggacacacaggc 303
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacagcatgttgctctctgctcctgatactgctgcaagtctcccaagggacacacaggc 382

                        
Query: 304 acagaggattttt 316
           |||||||||||||
Sbjct: 381 acagaggattttt 369


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space:   219081
Effective search space used:   219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no179_n06.g1 MSMg01no179_n06.g1 CHROMAT_FILE:
MSMg01no179_n06.g1 PHD_FILE: MSMg01no179_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:56 2005
         (185 letters)



>mm_chr8_11728060_11728644
          Length = 585

 Score =  331 bits (171), Expect = 2e-95
 Identities = 180/183 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgccgagcagaccgttacgtggctcatcaccctgggcgtgctgtagccgcccaagaaaac 60
           ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 201 tgccgagcagaccgttacgtggctcatcaccctgggcgtgctggagtcgcccaagaaaac 260

                                                                       
Query: 61  catctcggaccctgaggtcttcttgcaggcgtcgctcaaggacggggtggtcctatgccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catctcggaccctgaggtcttcttgcaggcgtcgctcaaggacggggtggtcctatgccg 320

                                                                       
Query: 121 gctgctggagcgcctgctgcccgggaccatcgagaaagtaagtggccatggctcggtctt 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 gctgctggagcgcctgctgcccgggaccatcgagaaagtaagtggccatggcacggtctt 380

              
Query: 181 cgg 183
           |||
Sbjct: 381 cgg 383


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 585
Length adjustment: 8
Effective length of query: 177
Effective length of database: 577
Effective search space:   102129
Effective search space used:   102129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)