GAATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTACCTGAGGAATACCAAAAGGCTG
AAAACACGTGAAAAATTGTTCAACATCCTCAATCATCAGAGAAATGCAAA
TCAAAACAACCCTGAGATTCCATCTCACACCAGTCAGAATGGCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAAT
CAGTCTGGCGGTTCCTCCAAAAATTGGACATAGTACTACTGGAGGATCCC
GCAATACATCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAA
GGACACATGCTCCACTATGCCCATAGCAGCCTTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGTCCCCCAACAGAGGAATTGATACAAAAAAAT
GTGGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAAT
TCATGAAACTCCTAGGTAAATGGTTTGACCTGGAGGGCATCAATCTGAGT
GAGGTAACCCAATCACAAAAGAACTCAAATGAAATGTACTCACTGATAAG
TGGATATTAACCCAGAAACTTAGTATAGCGAGATGTAAGGTACAATATGT
ACAACATATGAAACTGAAGAAGAACGATAACCAAAGTGTGTACAC

CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTACCTAATAAACCCATCCATAAAAATGTCAGTTGCTTACCTTTA
ATTAGATCAGGCTTTTCAGAGACTGGAAAGGATGGTGAATACTGAGCCTG
CAGATAAGCAGAACTCAGGTGATGAAGGAAGGACTGGGAACACATCTCAC
TCTTTAATGAATCAGTAGGGATTACTAAAGTGTTTGGAAAGTGCTTCTAA
AAGCTTGAAACAGAAAATGTTGCAGTCATGTATTTATATCATAAGAACCT
AGAAATATTGTTGAAGATAAGGTTTTACTGCTGTGAACAGACACCATGAT
ATAGGCAACTTTTACAAGAACAACATTAAATTGGGATTGGCTTACAGCTT
CAGAGGTTCAGTCCATTATCATCAAGGCAGGAACATGGCAGTGTCTAGGC
AGGCATTGTGTAGGAGGAGCTGAGAGTTCCACATCTTGTTCTGAAGGCAA
ACAGAAGACTGGCTTCCCCTAGGACTAGAGACTTAAAGCCTATGCCCACA
GTGACACACTTACTCCAAAAAGTCCCACTTCCTAATAGTGCTACCCCCTG
GGCCAAGTATATACCAATCATCACAGATATTGAAGATAAGCCAGAGACCA
ACCTCATTGCAGAGACTGGTGAGTAAAACTTATAGATCTGTGCAGTAGCA
ACATGGGTAGAACCAACATTTCTTTGTAACTAAGCTGAAATTGA

Query= MSMg01no181_d20.g1 MSMg01no181_d20.g1 CHROMAT_FILE:
MSMg01no181_d20.g1 PHD_FILE: MSMg01no181_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:54:40 2005
         (696 letters)



>mm_chr8_5771537_5772635
          Length = 1099

 Score = 1261 bits (652), Expect = 0.0
 Identities = 684/696 (98%), Gaps = 5/696 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactacctaataaacccatccataaaaatgtcagttgcttacctttaattagatc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactacctaataaacccatccataaaaatgtcagttgcttacctttaattagatc 264

                                                                       
Query: 65  aggcttttcagagactggaaaggatggtgaatactgagcctgcagataagcagaactcag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggcttttcagagactggaaaggatggtgaatactgagcctgcagataagcagaactcag 324

                                                                       
Query: 125 gtgatgaaggaaggactgggaacacatctcactctttaatgaatcagtagggattactaa 184
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 gtgatgaaggaaggactgggaacacatctcactctttaatcaatcagtagggattactaa 384

                                                                       
Query: 185 agtgtttggaaagtgcttctaaaagcttgaaacagaaaatgttgcagtcatgtatttata 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtgtttggaaagtgcttctaaaagcttgaaacagaaaatgttgcagtcatgtatttata 444

                                                                       
Query: 245 tcataagaacctagaaatattgttgaagataaggttttactgctgtgaacagacaccatg 304
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcataagaacctagaaatattgtcgaagataaggttttactgctgtgaacagacaccatg 504

                                                                       
Query: 305 atataggcaacttttacaagaacaacattaaattgggattggcttacagcttcagaggtt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atataggcaacttttacaagaacaacattaaattgggattggcttacagcttcagaggtt 564

                                                                       
Query: 365 cagtccattatcatcaaggcaggaacatggcagtgtctaggcaggcattgtgtaggagga 424
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 565 cagtccattatcatcaaggcaggaacatggcagtgtctaggcaggcatcgtgtaggagga 624

                                                                       
Query: 425 gctgagagttccacatcttgttctgaaggcaaacagaagactggcttcccctaggactag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gctgagagttccacatcttgttctgaaggcaaacagaagactggcttcccctaggactag 684

                                                                       
Query: 485 agacttaaagcctatgcccacagtgacacacttactccaaaaagtcccacttcctaatag 544
           || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 685 agccttaaagcctatgcccacagtgacacacttactccaaaaaggcccacttcctaatag 744

                                                                       
Query: 545 tgctaccccctgggccaagtatataccaatcatcacagatattgaagataagccagagac 604
           | |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 745 ttctaccccctgggccaagtatataccaatcatcacagatattgaagataggccagagac 804

                                                                       
Query: 605 caacctcattgcagagactggtgagtaaaactta---tagatctgtgcagtagcaacatg 661
           ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||
Sbjct: 805 caacctcattgcagagactggtgagtaaaacttaaagtagatctgtgcagtagcaacatg 864

                                               
Query: 662 ggtagaaccaacatttctttg-taactaagctgaaa 696
           |||||||||||||||| |||| ||||||||||||||
Sbjct: 865 ggtagaaccaacattt-tttggtaactaagctgaaa 899


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1099
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1089
Effective search space:   747054
Effective search space used:   747054
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)