Query= MSMg01no181_l14.b1 MSMg01no181_l14.b1 CHROMAT_FILE:
MSMg01no181_l14.b1 PHD_FILE: MSMg01no181_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:15 2005
(286 letters)
>mm_chr8_113092625_113093310
Length = 686
Score = 526 bits (272), Expect = e-154
Identities = 285/294 (96%), Gaps = 8/294 (2%)
Strand = Plus / Minus
Query: 1 actgattcaggcttgtctagctagtctctgcctggtgagtgctaggattgcaggtgactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 actgattcaggcttgtctagctagtctctgcctggtgagtgctaggattgcaggtgactg 250
Query: 61 ccacctcctgtcctgcttttacacgggctc--------tgtgtgtgtgtgtgtgtgtcag 112
|||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 249 ccacctcctgtcctgcttttacacgggctctgtgtgtgtgtgtgtgtgtgtgtgtgtcag 190
Query: 113 aactttgtacttcatatgtgtttgtgtttaaccattgaaccatatctctagctcatggtc 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aactttgtacttcatatgtgtttgtgtttaaccattgaaccatatctctagctcatggtc 130
Query: 173 ttaagagacttaagaaatatatgtagtagacattagacccagatagaaaaaaatgagcat 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttaagagacttaagaaatatatgtagtagacattagacccagatagaaaaaaatgagcat 70
Query: 233 ttggttaggaaccattcttattatcttagttaggagctggaagcccaaaggtga 286
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 69 ttggttaggaaccattcttagtatcttagttaggagctggaagcccaaaggtga 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no181_l14.g1 MSMg01no181_l14.g1 CHROMAT_FILE:
MSMg01no181_l14.g1 PHD_FILE: MSMg01no181_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:15 2005
(337 letters)
>mm_chr8_113004285_113005021
Length = 737
Score = 623 bits (322), Expect = 0.0
Identities = 331/334 (99%), Gaps = 2/334 (0%)
Strand = Plus / Plus
Query: 5 gaattccttcttca-taccatgttgagtgagtgtcgtcttgaaacttgatatggcatcac 63
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcttcaataa-atgttgagtgagtgtcgtcttgaaacttgatatggcatcac 263
Query: 64 tagccagggacagtggtggtggagccaggccaggctgctgagtggatcacaacagtccat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tagccagggacagtggtggtggagccaggccaggctgctgagtggatcacaacagtccat 323
Query: 124 gaatatgaccccatagcatggccgcggggtcagggactatgcccccaatgaaaacagtga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaatatgaccccatagcatggccgcggggtcagggactatgcccccaatgaaaacagtga 383
Query: 184 agctaaggcttggaagtcacatcagtgtggactgggtaaagacgtagagttgccttaggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agctaaggcttggaagtcacatcagtgtggactgggtaaagacgtagagttgccttaggc 443
Query: 244 agagggatgttccatagactggccatgagaaagatccttcttggtacttggagaatttca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agagggatgttccatagactggccatgagaaagatccttcttggtacttggagaatttca 503
Query: 304 ctgagaactgaagagatggggagtgtggggaatg 337
||||||||||||||||||||||||||||||||||
Sbjct: 504 ctgagaactgaagagatggggagtgtggggaatg 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
