Query= MSMg01no182_c14.b1 MSMg01no182_c14.b1 CHROMAT_FILE:
MSMg01no182_c14.b1 PHD_FILE: MSMg01no182_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:50 2005
(504 letters)
>mm_chr8_85768080_85768983
Length = 904
Score = 928 bits (480), Expect = 0.0
Identities = 495/504 (98%), Gaps = 8/504 (1%)
Strand = Plus / Plus
Query: 5 gaattcaccaagaaaccagcacacagcagctgcacctagcccactgacgtagacagacgt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccaagaaaccagcacacagcagctgcacctagcccactgacgtagacagacgt 264
Query: 65 gggcagagggttctattcggtgttttgtttaaagaggaggctgtctgtgaccaaagggtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggcagagggttctattcggtgttttgtttaaagaggaggctgtctgtgaccaaagggtc 324
Query: 125 tacacactatcctttgttgggtatatgtccacatacccatgggtgtgttgatgtgggaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tacacactatcctttgttgggtatatgtccacatacccatgggtgtgttgatgtgggaac 384
Query: 185 cagcctgcccgtagaggtggtccagtttctggttgagaagtccatgttgagatctgtctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagcctgcccgtagaggtggtccagtttctggttgagaagtccatgttgagatctgtctg 444
Query: 245 tttttcgtgacctaaaggctgctgcaggtctggactctggacctactgatgtcaagttct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttttcgtgacctaaaggctgctgcaggtctggactctggacctactgatgtcaagttct 504
Query: 305 gactgtgtccatggagggcaaagcagccagtgtcagtctgcctgtgactgtcaggcata- 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gactgtgtccatggagggcaaagcagccagtgtcagtctgcctgtgactgtcaggcataa 564
Query: 364 ---ccccccgggccaaccactgatttgctgacactgctctgtaaagtgaaatgtaaatgt 420
| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggact----gggccaaccactgatttgctgacactgctctgtaaagtgaaatgtaaatgt 620
Query: 421 ttactttgtcattctgcacatattttaccgtttttattttattttattttattttatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttactttgtcattctgcacatattttaccgtttttattttattttattttattttatttt 680
Query: 481 attttattttattttattttatct 504
||||||||||||||||||||||||
Sbjct: 681 attttattttattttattttatct 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 49
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_c14.g1 MSMg01no182_c14.g1 CHROMAT_FILE:
MSMg01no182_c14.g1 PHD_FILE: MSMg01no182_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:50 2005
(189 letters)
>mm_chr8_85855261_85855849
Length = 589
Score = 366 bits (189), Expect = e-106
Identities = 189/189 (100%)
Strand = Plus / Minus
Query: 1 tagtgttttcatttgtcggagtcagctgacagggacagctgggcgcgctctcaaccaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tagtgttttcatttgtcggagtcagctgacagggacagctgggcgcgctctcaaccaagg 330
Query: 61 ctgagaagagctcattttttgggaagccacatctgatgtgtggtagatttgaaattgttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ctgagaagagctcattttttgggaagccacatctgatgtgtggtagatttgaaattgttg 270
Query: 121 ctcggttggtccttttattcttgaacttctttgttccaagtttcaagggatgaaaaacgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ctcggttggtccttttattcttgaacttctttgttccaagtttcaagggatgaaaaacgg 210
Query: 181 aagtatgaa 189
|||||||||
Sbjct: 209 aagtatgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 589
Length adjustment: 8
Effective length of query: 181
Effective length of database: 581
Effective search space: 105161
Effective search space used: 105161
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
