Query= MSMg01no183_m08.b1 MSMg01no183_m08.b1 CHROMAT_FILE:
MSMg01no183_m08.b1 PHD_FILE: MSMg01no183_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:53 2005
(415 letters)
>mm_chr8_78071661_78072475
Length = 815
Score = 723 bits (374), Expect = 0.0
Identities = 401/410 (97%), Gaps = 2/410 (0%)
Strand = Plus / Plus
Query: 6 aattctataaagtttctgctttagtttataaatatagtgaatacagttgcttgagttttg 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 aattctataaagtttctgctttagtttataaatatagtgaatacagttgcttgagttttg 265
Query: 66 attatttattcatcattggatctctggagaaagtctgctcggtaatgtcatatagtctga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 attatttattcatcattggatctctggagaaagtctgctcggtaatgtcatatagtctga 325
Query: 126 aaacacttgctaggttctatttgtgatcatgttaacagtttctatgtctattcttttgag 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaacacttgctaggttctatttgtgatcatgttaacagtttctatgtctattcttttgag 385
Query: 186 ctccgttgcttttttagtgctgttgtttgttattacagttgacagtgttttccggttggt 245
||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 386 ctccgttgcttttttggtgctgttgtttgttattacagttgacagtgttttctggttggt 445
Query: 246 ataatgaacttgtattgtcttttctcttgtattctggaacagattgacacacttgtgcta 305
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 446 aaaatgaacttgtattgtcttttctcttgtattctggaacagattgacacacttgggcta 505
Query: 306 actcttctttaaatatttgtaagcatttttcaatgaaaccaaccagtctggtgattcctt 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 actcttctttaaatatttgtaagcatttttcaatgaaaccaaccagtctggtgattcctt 565
Query: 366 ttgcttgac-gcctgtatggtttggataacagaataaatggggaagatgg 414
||||||||| | ||||| |||||||||||||||| ||||||||||||||
Sbjct: 566 ttgcttgacagt-tgtattgtttggataacagaatgaatggggaagatgg 614
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_m08.g1 MSMg01no183_m08.g1 CHROMAT_FILE:
MSMg01no183_m08.g1 PHD_FILE: MSMg01no183_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:53 2005
(292 letters)
>mm_chr8_78224922_78225613
Length = 692
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Minus
Query: 1 agtaagttagataccaacaaaccaaataacccaattaaaaatgaagtacagagctaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 agtaagttagataccaacaaaccaaataacccaattaaaaatgaagtacagagctaaaca 414
Query: 61 gaaaattctcaatgtggggagagtattttaggggtgataccaagatgggtacttccccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 gaaaattctcaatgtggggagagtattttaggggtgataccaagatgggtacttccccat 354
Query: 121 ctcaaagggcaggaggaatgtaggtgagaggagaggctgatattgcgatataaagtggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctcaaagggcaggaggaatgtaggtgagaggagaggctgatattgcgatataaagtggat 294
Query: 181 aaataaatttaattaccccacaaaagaagtgaatggcatgattcctaatgataatctgct 240
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 293 aaagaaatttaattaccccacaaaagaagtgaatggcatgattcctagtgataatctgct 234
Query: 241 atactcataggttggtgcctagcccaattgtcatcagagaggcttcacccag 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 atactcataggttggtgcctagcccaattgtcatcagagaggcttcacccag 182
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
