TTCTAATTNNNTATATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCGCGGAATTCTCCATTTTGGACATTTTTATGACGATGAG
GAGAACCATGTACTTTGGGAGTTAGGGCTCTGATTAATCTTCACAGCATC
AATCCTGTCAATATCATTTCCCCCTCAGAGAAGAAAGTGGAAGTACAAAC
ATCCTGTCACCAGGCATTTATGACCAGGTTCCAACTAAGGACACCTAACT
GTCATTCACCAGGCTTTTTATCATCATTCACAAGATCTGCTGTGAATGTG
GAAGTAGTTCTGGGGAGATGATTTCATGATGAAGAAAAGGCCAAGATAGG
TACCAAGGGGGCACAGACTCTTTTGTTGCTGCACCCCTCTGTCCAGCCAG
TGTGGCTGAATTGGCAAGTTCCAGGTTCTGAGAAGAGCTCTTTGTCAAAA
ACTGAGGTAGACAGACATAGAAGAAGATACCTAGTGCTGACCCCTGGTCT
CTAGATTTACAAGTGTATATGAACACATGTATAGGCATGAATCATACACA
TGTATATAAGGGTACATCATATGCATGTATAAACATTCAAAACATTTATA
AAAATGACATCAGTGATATTTGCTAAGATAGATGAAGTTCTCTTGTAATT
ACACGGGTTTTATGGCTCACTTCTCTTAGTGAGTAACTTTCTACTTGGTT
CTGAGCAGTGGTTCTCAACCTATGTCTCG

TCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGAGTAAGAACACAAAGACAA
CATTCAGCATCAAACTTAAAACGGACTATAGATCTCATCACATAAATCAT
AAAGTGAGCGTGACACAATCCAGATTGCCCAGCAAACCACGAACTATGAA
AGTTTCAACTTGTAATACAATGCTGAATGACAGACTTTGGCATCCTGTGA
CTGATTCTAAGCACCTGTTATACAGTGGCCCTAATGAGTAAAGGCAAACA
TTTTAGATGAATTAAGCAAAAGAGAAAGTCACAATGACATGAACAAAAGA
GATGAAGATATCTATTCTTATTCTACCCCCCCCTGTAAAATCACTGAAAT
TCAAAGTAAATCAGTTGAAGACTATAGGATGAAGTTGGCTAAGAATTAGT
GAATTTAATGATAAATAAATTGAGTAGAAGTAATTCTACATGAAAGAGAA
ATACATGGTGTCAAAATAATGGATGTACATTTCATTACTATGGAATGAGA
GGAAAATTGAACAGTCATATCTTTGGAAACACATGAGAATAGAAAGAGTA
CTATAGAATATGACTATACAATAGTCATACCTGGGTTTGAAGGGCCAATA
ACTGAGAGCTTCCCAAATCAAATATATCTATATATTCAATAAGCTCAAGA
AACATTTGAACCCAATATAAAAGAAAAGAATCTATACTC

Query= MSMg01no184_f24.b1 MSMg01no184_f24.b1 CHROMAT_FILE:
MSMg01no184_f24.b1 PHD_FILE: MSMg01no184_f24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:43 2005
         (311 letters)



>mm_chr8_33473484_33474194
          Length = 711

 Score =  586 bits (303), Expect = e-172
 Identities = 303/303 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccattttggacatttttatgacgatgaggagaaccatgtactttgggagttag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccattttggacatttttatgacgatgaggagaaccatgtactttgggagttag 264

                                                                       
Query: 65  ggctctgattaatcttcacagcatcaatcctgtcaatatcatttccccctcagagaagaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggctctgattaatcttcacagcatcaatcctgtcaatatcatttccccctcagagaagaa 324

                                                                       
Query: 125 agtggaagtacaaacatcctgtcaccaggcatttatgaccaggttccaactaaggacacc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtggaagtacaaacatcctgtcaccaggcatttatgaccaggttccaactaaggacacc 384

                                                                       
Query: 185 taactgtcattcaccaggctttttatcatcattcacaagatctgctgtgaatgtggaagt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taactgtcattcaccaggctttttatcatcattcacaagatctgctgtgaatgtggaagt 444

                                                                       
Query: 245 agttctggggagatgatttcatgatgaagaaaaggccaagataggtaccaagggggcaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agttctggggagatgatttcatgatgaagaaaaggccaagataggtaccaagggggcaca 504

              
Query: 305 gac 307
           |||
Sbjct: 505 gac 507


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space:   212004
Effective search space used:   212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no184_f24.g1 MSMg01no184_f24.g1 CHROMAT_FILE:
MSMg01no184_f24.g1 PHD_FILE: MSMg01no184_f24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:58:43 2005
         (289 letters)



>mm_chr8_33566446_33567134
          Length = 689

 Score =  555 bits (287), Expect = e-162
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgagtaagaacacaaagacaacattcagcatcaaacttaaaacggactatagatctca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tctgagtaagaacacaaagacaacattcagcatcaaacttaaaacggactatagatctca 428

                                                                       
Query: 61  tcacataaatcataaagtgagcgtgacacaatccagattgcccagcaaaccacgaactat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tcacataaatcataaagtgagcgtgacacaatccagattgcccagcaaaccacgaactat 368

                                                                       
Query: 121 gaaagtttcaacttgtaatacaatgctgaatgacagactttggcatcctgtgactgattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 gaaagtttcaacttgtaatacaatgctgaatgacagactttggcatcctgtgactgattc 308

                                                                       
Query: 181 taagcacctgttatacagtggccctaatgagtaaaggcaaacattttagatgaattaagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 taagcacctgttatacagtggccctaatgagtaaaggcaaacattttagatgaattaagc 248

                                                          
Query: 241 aaaagagaaagtcacaatgacatgaacaaaagagatgaagatatcta 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aaaagagaaagtcacaatgacatgaacaaaagagatgaagatatcta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space:   190400
Effective search space used:   190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)