Query= MSMg01no185_a01.b1 MSMg01no185_a01.b1 CHROMAT_FILE:
MSMg01no185_a01.b1 PHD_FILE: MSMg01no185_a01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:36 2005
(622 letters)
>mm_chr8_58754723_58755744
Length = 1022
Score = 1118 bits (578), Expect = 0.0
Identities = 608/618 (98%)
Strand = Plus / Plus
Query: 5 gaattccagtatgctcttctgggacactcaaagctcatgtcttcctcatcaataaatgga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtatgctcttctgggacactcaaagctcatgtcttcctcatcaataaatgga 264
Query: 65 gaaattgcttgtgtgacattaaagaagattgtggaccatcactaactcgtgggaagaatg 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 265 gaaattgcttgtgtgacattaaagaagattgtggaccatcactaactcttgggaagaatg 324
Query: 125 ggtttttgttaaagaagagatgaagcttactgtgggattctggagttctttccctgcgta 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggtttttgttaaagaagagatggagcttactgtgggattctggagttctttccctgcgta 384
Query: 185 tcttatctgggttgttgacaaggatccaagggcatgtagacattttctatactttgttgg 244
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 385 tcttatctgggttgttgacaaggagccaagggcaagtagacattttctatactttgttgg 444
Query: 245 atagtatcacagtcgcatctgccccatctggagagttcatccttgtaagttggggtcttg 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 atagtatcacagtcgcatctgccccatccggagagttcatccttgtaagttggggtcttg 504
Query: 305 gtcctgaatgatctatgcttgaccccagcatcaagggatactagcttagccaaggttgta 364
||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 505 gtcctgaatgatccatgcttgaccagagtatcaagggatactagcttagccaaggttgta 564
Query: 365 catttatgaagcattctggcaatgattttgcttcattgaacacctgacccagaatcagag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catttatgaagcattctggcaatgattttgcttcattgaacacctgacccagaatcagag 624
Query: 425 caaacacaacaaatgcagacactatagcctttgtgaagattccaagtggcaaaggagcct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaacacaacaaatgcagacactatagcctttgtgaagattccaagtggcaaaggagcct 684
Query: 485 ttcgccatgccagggctccctgcttaaaattcaccagtgtccacagagaagcaaggattc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttcgccatgccagggctccctgcttaaaattcaccagtgtccacagagaagcaaggattc 744
Query: 545 atgagagtggaggaaatacagaaaatctctttgacagagccttggctttatctaaatttg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 745 atgagagtggaggaaatacagaaaatctctttgacagagccttggctttatctaagtttg 804
Query: 605 gcctgttcacactgggaa 622
||||||||||||||||||
Sbjct: 805 gcctgttcacactgggaa 822
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_a01.g1 MSMg01no185_a01.g1 CHROMAT_FILE:
MSMg01no185_a01.g1 PHD_FILE: MSMg01no185_a01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:36 2005
(292 letters)
>mm_chr8_58921076_58921767
Length = 692
Score = 445 bits (230), Expect = e-129
Identities = 264/288 (91%), Gaps = 20/288 (6%)
Strand = Plus / Minus
Query: 1 cactgggagcaaagaatggactgtaaattcccatgaggtgtgggtctctgcgatgagcca 60
|||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||
Sbjct: 643 cactgggagcaaagaatggactataaatttccatgaggtgtgggcctctgcgatgagcca 584
Query: 61 gatttcgcattgctgacataacataaggtgggggaagatttatttagctcagggttctag 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 583 gatttcgcattgctgacataacacaaggtgggggaagatttatttagctcagggttctag 524
Query: 121 tccatctcatatcattgtcagagagagagagagagagagagagagagagagagagtggag 180
||||||||||||||||||| |||||||||||||||||||||
Sbjct: 523 tccatctcatatcattgtc--------------------agagagagagagagagtggag 484
Query: 181 aaaaacgagtcaaggcatttatatgtgtatttctattggctttcttccactagtctcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 aaaaacgagtcaaggcatttatatgtgtatttctattggctttcttccactagtctcttg 424
Query: 241 agtctacagagatcctgcacccaacatttctaccatctcccaaaatgg 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 agtctacagagatcctgcacccaacatttctaccatctcccaaaatgg 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
