XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTTCT
TATTAAAAGCATTTAAGTGTTGTCAGATTTTACCAGAATTTGCTAGATTG
TGTTTATCTTTATGATATTCCTCCAAACTATGCCAGAAAAGCATTATCTC
TCTTTTCCCATTTGGGATAGAATCAGTCTTAGCTATAGCCACTATAGATC
TTCACATTATTTTGAAGTTTTTAGTGTCTTATTGAAATAAAATAAATTAT
TTTTGATGTAAGTACATCTTCTATCATTTTATAGACTTTAATAAAATGAC
TTACATGGGTACCTCATAGGGAAAATGTCAGCTCAAAAAAAAAAAAGCAC
ACACCACCAATTTAACGTATACATTGTAAAAATTGGTTATATAGGGTTTG
ACCAATGTTCTACACTCAAAGAACCCTAATGGATCTTCACATGTCTTCCA
GAGATCTAAAAGACACAGTGAGTTTGAAAAACTTTTGCGAAGTACCAAGT
ATAAGCTATAGGAGGAATTAGCAGATGTTCCCATAACAGTTCCCTCCTGT
TCCAAGTGGAAGAGGTTCTGTCCAAACATCAGCCACAGGCAAAAGCCATG
TGTAGTTCTCTAAGAGCTTACAAGTCAACTCGAGCCATGGGAACCGTAGA
TAAGGGGTGGATGGGTTGGGTGAGGTTCTCCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTTTAGATCTGCACCCCATGTTT
AACTGAGTTGTTTTCTTGATAATCTAGTTTTTTGAGTTCTTTATATAATT
TGGACACAAGTCCTCTATCAGATATATTATTGTTAAAAATTCTTTTCCCA
TTCTGTAGGCTGTTGTGTTGCTCAAAAAGGGCAGTGTCCTCTGCCATGTG
AAGTTTTTCTGGTTCAGGAGGTAGGACAGTGTCCTCTGCTGTGTGAAGCG
TTTCAGTTTCAGGAAGTCCCATTTATTAATTGTTGATCTTAGTGCCCGTG
CCATTATTGTTCTGTCCAGAAAGACTTTTCCTGGACCAATGAGTGCAAGG
CTCTGAGACTCCCTTTTTGGTTCCACTGAGCAACATACCTTTCATCTTCT
GATATCTTCTTCAATGCCTTAGTTTTTAATTATACAAGTCTTTCACTAGC
TTGGTTGGAGTTACTCTAAGATGTTTCGTATATTTGAGGCTATCGTGAAA
GGTGTTATTTCCCTGATTGCTTGCTCAGTCCATTTGTCGTTTGTATATAG
AAGGGCTACTTATCTTTGTGAGTTAATTTTGTATCCAGCTACTTTGCTGA
CAGTGTTTACCAGCTGTTGGAGTTACTCACGGAAACT

Query= MSMg01no185_o07.b1 MSMg01no185_o07.b1 CHROMAT_FILE:
MSMg01no185_o07.b1 PHD_FILE: MSMg01no185_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:43 2005
         (627 letters)



>mm_chr8_110519802_110520834
          Length = 1033

 Score = 1056 bits (546), Expect = 0.0
 Identities = 607/630 (96%), Gaps = 8/630 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttcttattaaaagcatttaagtgttgtcagattttaccagaatttgctagatt 64
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct: 833 gaattctttcttattaaaagcgtttaagtgttgtcagattttaccagaatttgatagatt 774

                                                                       
Query: 65  gtgtttatctttatgatattcctccaaactatgccagaaaagcattatctct-cttttcc 123
           |||  ||| ||||||||||||||||| ||||||| ||||||||||||||| | |||||||
Sbjct: 773 gtgcatatatttatgatattcctccatactatgctagaaaagcattatct-tgcttttcc 715

                                                                       
Query: 124 catttgggatagaatcagtcttagctatagccactatagatcttcacattattttgaagt 183
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 714 catttgggatagagtcagtcttagctatagccactatagatcttcacattattttgaagt 655

                                                                       
Query: 184 ttttagtgtcttattgaaataaaataaattatttttgatgtaagtacatcttctatcatt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ttttagtgtcttattgaaataaaataaattatttttgatgtaagtacatcttctatcatt 595

                                                                       
Query: 244 ttatagactttaataaaatgacttacatgggtacctcatagggaaaatgtcagctc---- 299
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
Sbjct: 594 ttatagactttaataaaatgacttacatgggtacctcgtagggaaaatgtcagctcaaaa 535

                                                                       
Query: 300 aaaaaaaaaaaagcacacaccaccaatttaacgtatacattgtaaaaattggttatatag 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 534 aaaaaaaaaaaagcacacaccaccaatttaacgtatacattgtaaaaattggttatatgg 475

                                                                       
Query: 360 ggtttgaccaatgttctacactcaaagaaccctaatggatcttcacatgtcttccagaga 419
           |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggtttgaataatgttccacactcaaagaaccctaatggatcttcacatgtcttccagaga 415

                                                                       
Query: 420 tctaaaagacacagtgagtttgaaaaacttttgcgaagtaccaagtataagctataggag 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 tctaaaagacacagtgagtttgaaaaacttttgcgaagtaccaagtataagctataggag 355

                                                                       
Query: 480 gaattagcagatgttcccataacagttccctcctgttccaagtgg--aagaggttctgtc 537
           |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||
Sbjct: 354 gaattagcagatgttcccataacagttctctcctgttccaagtggaaaagaggttctgtc 295

                                                                       
Query: 538 caaacatcagccacaggcaaaagccatgtgtagttctctaagagcttacaagtcaactcg 597
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 294 caaacatcagccacaggcaaaagccatgtgtagttctctaaaagcttacaagtcaactcg 235

                                         
Query: 598 agccatgggaaccgtagataaggggtggat 627
           ||||||||||||||||||||||||||||||
Sbjct: 234 agccatgggaaccgtagataaggggtggat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1033
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1023
Effective search space:   631191
Effective search space used:   631191
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)