Query= MSMg01no186_a06.b1 MSMg01no186_a06.b1 CHROMAT_FILE:
MSMg01no186_a06.b1 PHD_FILE: MSMg01no186_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:52 2005
(328 letters)
>mm_chr8_102693248_102693976
Length = 729
Score = 590 bits (305), Expect = e-173
Identities = 320/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Minus
Query: 5 gaattcacaagaaa-gttaaagatgggtatgttctatcaaatactacaaacaaaaaattt 63
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 529 gaattcacaagaaatgttaaagatgggtgtgttctatcaaatactacaaacaaaaaatat 470
Query: 64 tttctccccattttttataactattatgaaaatgttttaagccccatgcacaaagtaaaa 123
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tttctccccaatttttataactattatgaaaatgttttaagccccatgcacaaagtaaag 410
Query: 124 ctgttgtttacataaaggactcctgctactcactgggaattttaatggcttggaactgtg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 ctgttgtttacataaaggactcctgctactcactgggaattttaatggcttggaactgtg 350
Query: 184 agccctttcctcttggggcagtaagcctttccatttgagccactgtcatttccccctgga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 agccctttcctcttggggcagtaagcctttccatttgagccactgtcatttccccctgga 290
Query: 244 agcagtgccacttttccttcatcctccgttttcccgtataccaattctaagacaatccaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 agcagtgccacttttccttcatcctccgttttcccgtataccaattctaagacaatccaa 230
Query: 304 tcaaataagactctgaggtcagacc 328
|||||||||||||||||||||||||
Sbjct: 229 tcaaataagactctgaggtcagacc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 729
Length adjustment: 9
Effective length of query: 319
Effective length of database: 720
Effective search space: 229680
Effective search space used: 229680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_a06.g1 MSMg01no186_a06.g1 CHROMAT_FILE:
MSMg01no186_a06.g1 PHD_FILE: MSMg01no186_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:00:52 2005
(292 letters)
>mm_chr8_102545336_102546027
Length = 692
Score = 547 bits (283), Expect = e-160
Identities = 289/291 (99%)
Strand = Plus / Plus
Query: 1 agtgaaaattgcttagtcgaagtcatacaactggtaaataataacgccaagagacactta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgaaaattgcttagtcgaagtcatacaactggtaaataataacgccaagagacactta 260
Query: 61 tgactttaaacctattactttattcgttcattttctgaatatgttaaaggtgatttaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgactttaaacctattactttattcgttcattttctgaatatgttaaaggtgatttaatg 320
Query: 121 aatatttaattaaggtctgacacagtagtaaacctgaagaatgaataacagcataaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatttaattaaggtctgacacagtagtaaacctgaagaatgaataacagcataaatat 380
Query: 181 aagcagagtaaaatagatggcctcccctcctcatgtgacatttatggtctcgtctggaag 240
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 381 aagcagagtaaaatagacggcctcccctcctcatgtgacatttatggtctcatctggaag 440
Query: 241 aaaacaaagacattgcaatgtccattacccagaagaggtcacacatggtta 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaacaaagacattgcaatgtccattacccagaagaggtcacacatggtta 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space: 193289
Effective search space used: 193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
