Query= MSMg01no186_p09.b1 MSMg01no186_p09.b1 CHROMAT_FILE:
MSMg01no186_p09.b1 PHD_FILE: MSMg01no186_p09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:07 2005
(315 letters)
>mm_chr8_83147397_83148111
Length = 715
Score = 528 bits (273), Expect = e-154
Identities = 305/323 (94%), Gaps = 14/323 (4%)
Strand = Plus / Plus
Query: 5 gaattcactcagaggagtgaatccctgcagaactgtggattaggcatatgtctctggtga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 gaattcactcagaggagtgaatccctgcagaactgtggattaggcatatgtctctggtga 252
Query: 65 tctgggcagtc------------at-ctgggcaagatgtctacaaatctgtaattttatg 111
||||||||||| || |||| |||||||||||||||||||||||||||||
Sbjct: 253 tctgggcagtcttaaggaagaaaatactgg-caagatgtctacaaatctgtaattttatg 311
Query: 112 aaacccacaaggttggtactgtgaacgcttccagttcacagactctgacacttccaggtc 171
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 312 aaacccacaaggttggtactgtgaatgcttccagttcacagactctgacacttccaggtc 371
Query: 172 ccagctaaattctgtagaaatatatgagctagtttttgatgacctgaggtttgagaactg 231
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 372 ccagctaaattctgtagaaatatatgagctattttttgatgacctgaggtttgagaactg 431
Query: 232 cttgttgtcacagcatgaacatacatgctcatgaacataacactatgctacgctacagtt 291
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 432 cttgttgtcacagcatgaacatacatgttcatgaacataacactatgctacgctacagtt 491
Query: 292 actgtataactaatcaccacaaa 314
|||||||||||| ||||||||||
Sbjct: 492 actgtataactagtcaccacaaa 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_p09.g1 MSMg01no186_p09.g1 CHROMAT_FILE:
MSMg01no186_p09.g1 PHD_FILE: MSMg01no186_p09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:07 2005
(282 letters)
>mm_chr8_83274031_83274711
Length = 681
Score = 522 bits (270), Expect = e-153
Identities = 279/282 (98%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 tgggaaggaaaagtgtattatcttaaggtgaaccctcctccctagggtggtcccttagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 481 tgggaaggaaaagtgtattatcttaaggtgaaccctcctccctagggtggttccttagcc 422
Query: 61 aggtgcctgatctgcaggcttaacccttgggcctctttccacctagaggtaatttcaacg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 421 aggtgcctgatctgcaggcttaacccttgggcctctttccacctagaggtaatttcaatg 362
Query: 121 cttcctccattgtttaaaaacaaccctctcaaagttattagagctgcttccttgagcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cttcctccattgtttaaaaacaaccctctcaaagttattagagctgcttccttgagcatg 302
Query: 181 tggccagacctctgaaaaaaaaagtaacattgcccgcccagctggccctccagtgggatg 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tggccagacctctg-aaaaaaaagtaacattgcccgcccagctggccctccagtgggatg 243
Query: 241 gagcctcgggagccctttcctccactggtttgagtcttgggc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gagcctcgggagccctttcctccactggtttgagtcttgggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 681
Length adjustment: 9
Effective length of query: 273
Effective length of database: 672
Effective search space: 183456
Effective search space used: 183456
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
