Query= MSMg01no188_f14.b1 MSMg01no188_f14.b1 CHROMAT_FILE:
MSMg01no188_f14.b1 PHD_FILE: MSMg01no188_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:59 2005
(320 letters)
>mm_chr8_100387062_100387781
Length = 720
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Minus
Query: 5 gaattcagaacaataaacagttttgtttaaatatgatgtatgtggtccctatttgaattc 64
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 520 gaattcagaacaataaacagttttgtttaaatataatgtatgtggtccctatttgaattc 461
Query: 65 acttgcagtggttcaagggcacataagagaccgcggcaatgctgccttagattgcttatt 124
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 460 acttgcagtggttcaagggcacataagggaccgcggcaatgctgccttagattgcttatt 401
Query: 125 cccgaggtgctaatccctcgatcatcataaaaaagatcataattatttctagatttcctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cccgaggtgctaatccctcgatcatcataaaaaagatcataattatttctagatttcctt 341
Query: 185 gctgctgtatgacttgcaagcccatacccagacactggtgtcatgtatattttattaaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gctgctgtatgacttgcaagcccatacccagacactggtgtcatgtatattttattaaaa 281
Query: 245 cctcaccaagcttcagcaaagataactattcatacctccagaaatttttattcctgttta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 cctcaccaagcttcagcaaagataactattcatacctccagaaatttttattcctgttta 221
Query: 305 tccacaatgggtgaaa 320
||||||||||||||||
Sbjct: 220 tccacaatgggtgaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no188_f14.g1 MSMg01no188_f14.g1 CHROMAT_FILE:
MSMg01no188_f14.g1 PHD_FILE: MSMg01no188_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:03:59 2005
(286 letters)
>mm_chr8_100265201_100265886
Length = 686
Score = 530 bits (274), Expect = e-155
Identities = 281/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 actaaccaactcaactccattgctctacattcatggcactgactcccacctgactgactc 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 actaaccaactcaactccattgctctacattcacggcactgactcccacctgactgactc 260
Query: 61 aactccactgcattgaattcaactgactgaacaggactaagtcaatttactgaactgtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactccactgcattgaattcaactgactgaacaggactaagtcaatttactgaactgtct 320
Query: 121 cgcagtttgaaatcactttcaaacatggctactcctcctacaaaagtaagcttacctaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgcagtttgaaatcactttcaaacatggctactcctcctacaaaagtaagcttacctaca 380
Query: 181 tgctctgtactttgtacatatgtactaaaggtgtgtgtgtgtgtgtgtgttgcagccaga 240
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 381 tgctctgtactttgtacatatgtactaaaggtgtgtgtgtgtgtgtgt--tgcagccaga 438
Query: 241 tcacacagacctaagacgtctttggatgttattcatttctggag 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tcacacagacctaagacgtctttggatgttattcatttctggag 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
