Query= MSMg01no194_k03.b1 MSMg01no194_k03.b1 CHROMAT_FILE:
MSMg01no194_k03.b1 PHD_FILE: MSMg01no194_k03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:33 2005
(460 letters)
>mm_chr8_38944051_38944910
Length = 860
Score = 743 bits (384), Expect = 0.0
Identities = 387/388 (99%)
Strand = Plus / Minus
Query: 73 cctcttctataatgactattatacagagaggcatgtatatatgtatatgtgtcttagagt 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 cctcttctataatgactattatacagagaggcatgtatatatgtatatgtgtcttagagt 801
Query: 133 tttattgctgtgaacagaaaccatgaccaagtcaagtcttaaaaagaacaatatttaatt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tttattgctgtgaacagaaaccatgaccaagtcaagtcttaaaaagaacaatatttaatt 741
Query: 193 ggggctggcttacaggttcaaaggtccaggatcctcaaggcaggaacacagcagaatcca 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggggctggcttacaggttcaaaggtccaggatcctcaaggcaggaacacagcagaatcca 681
Query: 253 ggcaggcatggtgcaggaggctcttgtcttagagataattcattctctctttctccaaag 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggcaggcatggtgcaggaggctcttgtcttagagataattcattctctctttctccaaag 621
Query: 313 gtattaaatatcctgtagattttcagttatatgtgcaccctcgtgaaatctccctacaaa 372
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 620 gtattaaatatcctgtagattttcagttatatgtgcagcctcgtgaaatctccctacaaa 561
Query: 373 ttgtggacatgtgaattgatgaagtcattatgcatgtcaggtgcacacagtcatattgtt 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgtggacatgtgaattgatgaagtcattatgcatgtcaggtgcacacagtcatattgtt 501
Query: 433 gaaatgtcatgaatgcaatagttctgtc 460
||||||||||||||||||||||||||||
Sbjct: 500 gaaatgtcatgaatgcaatagttctgtc 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_k03.g1 MSMg01no194_k03.g1 CHROMAT_FILE:
MSMg01no194_k03.g1 PHD_FILE: MSMg01no194_k03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:33 2005
(408 letters)
>mm_chr8_38822969_38823776
Length = 808
Score = 768 bits (397), Expect = 0.0
Identities = 406/409 (99%), Gaps = 2/409 (0%)
Strand = Plus / Plus
Query: 1 tacatataatttgatattttgcctgtacaacattttaaaattcatgtcttctgtgccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacatataatttgatattttgcctgtacaacattttaaaattcatgtcttctgtgccaaa 260
Query: 61 caaaacaaaacaaaatgtcttctgggtatgctctagcatttctggacaactcgggatcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaacaaaacaaaatgtcttctgggtatgctctagcatttctggacaactcgggatcct 320
Query: 121 ttttgcttttctcagttcttcaatgttaaaaagagaaacgttttgaaatatagggagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttgcttttctcagttcttcaatgttaaaaagagaaacgttttgaaatatagggagtca 380
Query: 181 gattctgagtttgaaattctgttctaaaataaattatttcaatttctggggacaagttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattctgagtttgaaattctgttctaaaataaattatttcaatttctggggacaagttat 440
Query: 241 ttctgagtcagtttattcctctaataaaaatagtactagaaaaacagaacttgaagatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgagtcagtttattcctctaataaaaatagtactagaaaaacagaacttgaagatat 500
Query: 301 ttcttcttgatgtagttgctgtgtgatctaggatgttaacctggcac-cttctggtcctt 359
|||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 501 ttcttcttgatgtagttgctgtgtgatctaggatgttaacctgg-agtcttctggtcctt 559
Query: 360 tgggcatgccctctattgttattctggattagactgtaacatatcaact 408
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgggcatgccctctattgttattctggattagactgtaacatatcaact 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
