CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGCATTCTTTCCAAGAAAACACAGTGAGGTTTGTAACAGTGACCTCT
CAGTTTTGGCACCTGTATCTGTTCGAGTTTCATTTTACTTTTGATGCTGT
TGCAAATAATCTAAGAAAAGCAAGGATTTTTGTTTTTGTTTGTTTTGATA
ATTTGGACTGAAATTAATTCCAGGTTACAGCCCATTATTGGTGGAAATCA
AGGCAGGAGTTTAAGCATCCTATTCACACTCTATAGTAGATAAAGAATAA
ATAATCCTGTCTGTTTGCTCTTTTGTACTTGTACACATTTAACTTTCTTC
ATTCATAGAGTCCAGGGTCCACTCCACAAAATGTTGCCTTTCATATCCAT
CTGGATGTTTTCAGATCAATCAGAAATCAAGATGAGTCCCCCATAGGCCA
ACATGACTTACATAACTCATCATTAAGATTCTTTCCCCTGGTGATTCTAG
GTAGGGTCTTGTTGACAGTCAAAATCAACCAACACAAAGTCTAAATATTC
CTTTTAGTTCCTTCTAATCATTATTCAGTAACCATGTATGTTCATTTCCT
TTCCTGTTTTGATGAAAGGGAAGTTTGTTTTTTTCTAATAGTTTGGAGGC
ATAGAGACCATCATGGTGGAAAGCTAAAGGATGGTGAGGTATCTGTTCAC
ATGACAGACACAGTTCCACCATCA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAAAAGAAAATGCATTTAAAAGACTG
AAGATATATACATATATATACACACACATATATATGTATATATATGTATA
TATATAAAATATGTGTGTGTGTGTATAATACATATACATATATAACTGAG
GCCTTGGTTTCTTTCCCAGAACTAGCTAGTAAATTCAAAGGAATAAAAAT
GTTGATACTCTTATTTGTTGGAAGCTCTCTTTTTAGTTAAAAGAGCTGTT
TATGGCAAAGGATCTTGACATTTGTATTAAGCAGCAGCTTACTGAAAGGG
AAAACATTTCATATTCTACACAGCCAATACCGGGCTAATATTCAAAATAC
ATAAAGAACTCAAAAATCTAGAAATCAAGAAAAGTAAGTAAAGTAAAAAT
GGGGCACAGGTTTAAAGAGAGAGTTCTCAAAAGAGGAACACAAGTTGCTG
GGAAATATTAAAGAATGTTCAACATCCTTAGTCATCAGAGAGACACAAAT
CAAAACTACTCTAAGATTGCATTTTACACCTGTCAGAATGGCTAAGATCA
ATAAAATCAAGTGACAGCTCATGCTGGAGAGGACACATGGTAAGGGCAGT
ATTCATCTACTATTCGTGAGAGTGCAAACTTGGACAGTAACTAAGAAAAT
CAGTATGTCCGATTCCTGGGAAGATGGGAATCACTCACCCCAAGATTCAA

Query= MSMg01no197_n23.b1 MSMg01no197_n23.b1 CHROMAT_FILE:
MSMg01no197_n23.b1 PHD_FILE: MSMg01no197_n23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:17:54 2005
         (666 letters)



>mm_chr8_84200993_84202057
          Length = 1065

 Score = 1266 bits (655), Expect = 0.0
 Identities = 661/663 (99%), Gaps = 2/663 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcagcattctttcc-aagaaaacacagtgaggtttgtaacagtgacctctcagttt 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagcattctttccaaagaaaacacagtgaggtttgtaacagtgacctctcagttt 263

                                                                       
Query: 64  tggcacctgtatctgttcgagtttcattttacttttgatgctgttgcaaataatctaaga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tggcacctgtatctgttcgagtttcattttacttttgatgctgttgcaaataatctaaga 323

                                                                       
Query: 124 aaagcaaggatttttgtttttgtttgttttgataatttggactgaaattaattccaggtt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaagcaaggatttttgtttttgtttgttttgataatttggactgaaattaattccaggtt 383

                                                                       
Query: 184 acagcccattattggtggaaatcaaggcaggagtttaagcatcctattcacactctatag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acagcccattattggtggaaatcaaggcaggagtttaagcatcctattcacactctatag 443

                                                                       
Query: 244 tagataaagaataaataatcctgtctgtttgctcttttgtacttgtacacatttaacttt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tagataaagaataaataatcctgtctgtttgctcttttgtacttgtacacatttaacttt 503

                                                                       
Query: 304 cttcattcatagagtccagggtccactccacaaaatgttgcctttcatatccatctggat 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttcattcatagagtccagggtccactccacaaaatgttgcctttcatatccatctggat 563

                                                                       
Query: 364 gttttcagatcaatcagaaatcaagatgagtcccccataggccaacatgacttacataac 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gttttcagatcaatcagaaatcaagatgagtcccccataggccaacatgacttacataac 623

                                                                       
Query: 424 tcatcattaagattctttcccctggtgattctaggtagggtcttgttgacagtcaaaatc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tcatcattaagattctttcccctggtgattctaggtagggtcttgttgacagtcaaaatc 683

                                                                       
Query: 484 aaccaacacaaagtctaaatattccttttagttccttctaatcattattcagtaaccatg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaccaacacaaagtctaaatattccttttagttccttctaatcattattcagtaaccatg 743

                                                                       
Query: 544 tatgttcatttcctttcctgttttgatgaaagggaagtttgtttttttctaatagtttgg 603
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 744 tatgttcatttcctttcctgttttgatgaaagggaagtttgtttttt-ctaatagtttgg 802

                                                                       
Query: 604 aggcatagagaccatcatggtggaaagctaaaggatggtgaggtatctgttcacatgaca 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aggcatagagaccatcatggtggaaagctaaaggatggtgaggtatctgttcacatgaca 862

              
Query: 664 gac 666
           |||
Sbjct: 863 gac 865


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1065
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1055
Effective search space:   692080
Effective search space used:   692080
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)