Query= MSMg01no199_b07.b1 MSMg01no199_b07.b1 CHROMAT_FILE:
MSMg01no199_b07.b1 PHD_FILE: MSMg01no199_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:31 2005
(367 letters)
>mm_chr8_121901004_121901770
Length = 767
Score = 563 bits (291), Expect = e-165
Identities = 330/343 (96%)
Strand = Plus / Minus
Query: 25 gatttacaaactgacaggttcacatttccagctgccgcatggactttccagtcatctttc 84
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gatttacaaactggcaggttcacatttccagctgccgcatggactttccagtcatctttc 384
Query: 85 tattgctagatctttccatccaaacaccagggagttggtaaccctctcccaccctcccct 144
||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||
Sbjct: 383 cattgctagatctttccatccaaacaccggggagttggcaaccctctcccaccctcccct 324
Query: 145 acccccattcaataaacataaacggcccccggtccattggggctactgataggagtatga 204
|||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||
Sbjct: 323 acccccattcaataaacataaacggccctctgtccactggggctactgataggagtatga 264
Query: 205 gtgagaggttccgtaccggatcaaagcaactgcatgagctgggctaccccagcactcggg 264
|||||||||||| |||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 263 gtgagaggttccataccggatcaaagcaactgcatgagccaggctaccccagcactcagg 204
Query: 265 aggcagaggcaggcggatttctcagcctggtctacaaagtgagttctaggacaaccaggg 324
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aggcagttgcaggcggatttctcagcctggtctacaaagtgagttctaggacaaccaggg 144
Query: 325 ctatacagagaaaccctgtctggaaaaaaccaaccaaccaacc 367
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 ctatacagagaaaccctgtctggaaaaaaccaaccaaccaacc 101
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no199_b07.g1 MSMg01no199_b07.g1 CHROMAT_FILE:
MSMg01no199_b07.g1 PHD_FILE: MSMg01no199_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:19:31 2005
(451 letters)
>mm_chr8_121748600_121749451
Length = 852
Score = 812 bits (420), Expect = 0.0
Identities = 444/452 (98%), Gaps = 1/452 (0%)
Strand = Plus / Plus
Query: 1 catatatgaatattgtattcacagatttccatgcccccttctacctactccagatccccc 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatatgaatgttgtattcacagatttccatgcccccttctacctactccagatccccc 260
Query: 61 cccc-ataccttaaccaaaagaggtgctcatatccctagaaacaggatgcccagtgtagt 119
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 261 cccccataccttaaccaaaagaggtgctcatatccctggaaacaggatgcccagtgtagt 320
Query: 120 ctttagatgggaggggcaggaagaacagggtgtgtttgctctgtggtcctttttctaatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctttagatgggaggggcaggaagaacagggtgtgtttgctctgtggtcctttttctaatt 380
Query: 180 ttatttttcttccactgtttgctgtttaatatttgctgcccgaggcactgatcttcagat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatttttcttccactgtttgctgtttaatatttgctgcccgaggcactgatcttcagat 440
Query: 240 ttcttttttagcaacaaatttttttccaagaaagatcttaggcaggagctgtgacaaaca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcttttttagcaacaaatttttttccaagaaagatcttaggcaggagctgtgacaaaca 500
Query: 300 aagcataattaatggctcccggggcagtttccacggttgccacccacagagaaactctgg 359
||||||||||||||||||||||||||||||||||||||| || | |||||||||||||
Sbjct: 501 aagcataattaatggctcccggggcagtttccacggttgttacttagagagaaactctgg 560
Query: 360 ctgtgcaggtgggatatctggtctacctctcaagcgtccttggctcctctgaaaatgact 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtgcaggtgggatatctggtctacctctcaagcgtccttggctcctctgaaaatgact 620
Query: 420 tgaaatcactgcccaactgcttaggtttcctg 451
||||||||||||||||||||||||||||||||
Sbjct: 621 tgaaatcactgcccaactgcttaggtttcctg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
