Query= MSMg01no212_l13.b1 MSMg01no212_l13.b1 CHROMAT_FILE:
MSMg01no212_l13.b1 PHD_FILE: MSMg01no212_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:34 2005
(387 letters)
>mm_chr8_26939551_26940337
Length = 787
Score = 702 bits (363), Expect = 0.0
Identities = 378/383 (98%)
Strand = Plus / Minus
Query: 5 gaattcattgtcacagttttaagtatattgatacggaactaaaaattgcttactaaattt 64
|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 587 gaattcattggcacagttttaagtatattgatatggaactaaaaattgcttactaaattt 528
Query: 65 aaagctcctgctattttatgtataaccatgataaatttacaaacactggagagaaacacc 124
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 aaagcttctgttattttatgtataaccatgataaatttacaaacactggagagaaacacc 468
Query: 125 tttttagtatttttgtttttgttttctatgtatgtcttgttggatattcaagtgctttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tttttagtatttttgtttttgttttctatgtatgtcttgttggatattcaagtgctttgt 408
Query: 185 gtagataatgcctttatatgtttatgaaatacattatgcagtggaagcaagtggacattg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 gtagataatgcctttatatgtttatgaaatacattatgcagtggaagcaagtggacattg 348
Query: 245 accttcagtaaggacgtttttattgatgtttgtattaagtggtgaataagcacagtccat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 accttcagtaaggacgtttttattgatgtttgtattaagtggtgaataagcacagtccat 288
Query: 305 gcagtgttttcattctttagctgtgggtgcttggaatttgggtacagatgcatttgtgtc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gcagtgttttcattctttagctgtgggtgcttggaatttgggtacagatgcatttgtgtc 228
Query: 365 accaccccataaagtaccattgg 387
|| ||||||||||||||||||||
Sbjct: 227 acaaccccataaagtaccattgg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no212_l13.g1 MSMg01no212_l13.g1 CHROMAT_FILE:
MSMg01no212_l13.g1 PHD_FILE: MSMg01no212_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:34 2005
(340 letters)
>mm_chr8_26828398_26829137
Length = 740
Score = 555 bits (287), Expect = e-162
Identities = 325/347 (93%), Gaps = 18/347 (5%)
Strand = Plus / Plus
Query: 1 aggctcttcaattccttgggacttcagattctcattttatattttacagttttaaaatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctcttcaattccttgggacttcagattctcattttatattttacagttttaaaatta 260
Query: 61 agacatggaaagcatcatgttgtatactgtcagatatgcagtcctcccgacgggagcacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agacatggaaagcatcatgttgtatactgtcagatatgcagtcctcccgacgggagcacg 320
Query: 121 ggcatcttaggtttcttggcacctttgaggtcggagctcgtgcatgttgagaaatgattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcatcttaggtttcttggcacctttgaggtcggagctcgtgcatgttgagaaatgattt 380
Query: 181 ccctgcgtctttgttttgcctttttctcctttccttgcctcacccctgggtagctggtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctgcgtctttgttttgcctttttctcctttccttgcctcacccctgggtagctggtct 440
Query: 241 ttctgtttaacatatgcttgtgtggggggaagaggt-----ttcttttatgtcacccccc 295
||||||||||||||||||||||||||||||||||| || | |||| || ||
Sbjct: 441 ttctgtttaacatatgcttgtgtggggggaagagggcgcacttatgttat---actcc-- 495
Query: 296 cccc----atgctatgtataacctttgtttcaaaaacccatttccac 338
|||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ----taaaatgctatgtataacctttgtttcaaaaacccatttccac 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
