Query= MSMg01no212_p15.b1 MSMg01no212_p15.b1 CHROMAT_FILE:
MSMg01no212_p15.b1 PHD_FILE: MSMg01no212_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:53 2005
(346 letters)
>mm_chr8_71164844_71165589
Length = 746
Score = 642 bits (332), Expect = 0.0
Identities = 339/342 (99%), Gaps = 3/342 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggggaaaagaacactatcacaaatcccaaaaactgctgacaacctctgtgtca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggggaaaagaacactatcacaaatcccaaaaactgctgacaacctctgtgtca 264
Query: 65 aacacaatggaaactgtgaaccttttcttttaaacctcatgtccaatgttacacctcgca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aacacaatggaaactgtgaaccttttcttttaaacctcatgtccaatgttacacctcgca 324
Query: 125 ccatcccttaggaggctgaacctgggggaacttactccagccccaaagtcttcctaaacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccatcccttaggaggctgaacctgggggaacttactccagccccaaagtcttcctaaacc 384
Query: 185 tgctgaaaggacacaatctagaatcacttggggagagagtgtccacaaaggattacccag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgctgaaaggacacaatctagaatcacttggggagagagtgtccacaaaggattacccag 444
Query: 245 gtgacttggtttgtaggaataactgtgagaggttgtcttgatttccctaattgatatggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtgacttggtttgtaggaataactgtgagaggttgtcttgatttccctaattgatatggg 504
Query: 305 aaagcctagtcctactatgggcagtactattttctctagctt 346
|||||||||||| |||||||||||||||||| |||||||||
Sbjct: 505 aaagcctagtcc-actatgggcagtactatt--ctctagctt 543
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no212_p15.g1 MSMg01no212_p15.g1 CHROMAT_FILE:
MSMg01no212_p15.g1 PHD_FILE: MSMg01no212_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:53 2005
(286 letters)
>mm_chr8_71219359_71220044
Length = 686
Score = 553 bits (286), Expect = e-162
Identities = 286/286 (100%)
Strand = Plus / Minus
Query: 1 aggttctaatatttcagagtcaggtcctttactaactgagccaactgccctgtcaaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 aggttctaatatttcagagtcaggtcctttactaactgagccaactgccctgtcaaattt 427
Query: 61 tcaataacatctttacatcctagagtagggactaaacaaaataaaaatcaaaccaagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcaataacatctttacatcctagagtagggactaaacaaaataaaaatcaaaccaagcca 367
Query: 121 aactgtactgtgagtaatagacatagaccctgaccttgtttggggggaattgtgaggagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 aactgtactgtgagtaatagacatagaccctgaccttgtttggggggaattgtgaggagc 307
Query: 181 ctgctgttgtcatatgggcccgaaacacagcattttattactgtttgtgggtgtgcatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctgctgttgtcatatgggcccgaaacacagcattttattactgtttgtgggtgtgcatgt 247
Query: 241 gtgtgtatgcaggggtaatctggaggtattcagaaaagatatattg 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtgtgtatgcaggggtaatctggaggtattcagaaaagatatattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
