Query= MSMg01no213_b09.b1 MSMg01no213_b09.b1 CHROMAT_FILE:
MSMg01no213_b09.b1 PHD_FILE: MSMg01no213_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:02 2005
(664 letters)
>mm_chr8_59616513_59617577
Length = 1065
Score = 1255 bits (649), Expect = 0.0
Identities = 658/661 (99%), Gaps = 1/661 (0%)
Strand = Plus / Plus
Query: 5 gaattcaagtaatgattacctctgatagttaagtaccaaacatgaattaaaaattagaaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagtaatgaatacctctgatagttaagtaccaaacatgaattaaaaattagaaa 264
Query: 65 ctgagagggtgtgtaccaatgatttgcatcattgcaaatcatatgcaatatcatgagttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctgagagggtgtgtaccaatgatttgcatcattgcaaatcatatgcaatatcatgagttt 324
Query: 125 t-aaaaaaaggtcaaaaaacaaaactgggttttctagaagcacaaagaatgctgaaacag 183
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taaaaaaaaggtcaaaaaacaaaactgggttttctagaagcacaaagaatgctgaaacag 384
Query: 184 gcagttgccccatatctaagccttgtctcttaatccaggattaagtaacagaagcaaacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gcagttgccccatatctaagccttgtctcttaatccaggattaagtaacagaagcaaacc 444
Query: 244 tatcctgttgattctcaattgtttatgtattgaagtcctgaaagtttggagtggcataat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatcctgttgattctcaattgtttatgtattgaagtcctgaaagtttggagtggcataat 504
Query: 304 gtattattaatatccaattgcataagcttctggagacagactgcgtaattcataccagag 363
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtattattaatatccaattgcagaagcttctggagacagactgcgtaattcataccagag 564
Query: 364 ttttatacatctgtccctttgcctcctgggcaaatgttgagcaggactctgatgatataa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttttatacatctgtccctttgcctcctgggcaaatgttgagcaggactctgatgatataa 624
Query: 424 agatacaaaatagcgaattcatatttacagaaaccccaatgtattttgaagtataaagac 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agatacaaaatagcgaattcatatttacagaaaccccaatgtattttgaagtataaagac 684
Query: 484 ataaaacaaataaagctttcttttaggaaattcaaatatcgaaaataaagttgatcaggg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ataaaacaaataaagctttcttttaggaaattcaaatatcgaaaataaagttgatcaggg 744
Query: 544 gtgtcaggaataaaatttgtgggctagaggaatggctcagtggttaagaaccctgatctg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gtgtcaggaataaaatttgtgggctagaggaatggctcagtggttaagaaccctgatctg 804
Query: 604 acttctaggagactcaggtttgagtcccagcaaccacataagggctcacaatcatttgta 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 acttctaggagactcaggtttgagtcccagcaaccacataagggctcacaatcatttgta 864
Query: 664 a 664
|
Sbjct: 865 a 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1065
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1055
Effective search space: 689970
Effective search space used: 689970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_b09.g1 MSMg01no213_b09.g1 CHROMAT_FILE:
MSMg01no213_b09.g1 PHD_FILE: MSMg01no213_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:02 2005
(291 letters)
>mm_chr8_59727969_59728659
Length = 691
Score = 555 bits (287), Expect = e-162
Identities = 290/291 (99%)
Strand = Plus / Minus
Query: 1 tttcaggtccctctcctacagtatccttggggtggtgtaataaagccctgcctttcatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tttcaggtccctctcctacagtatccttggggtggtgtaataaagccctgcctttcatta 432
Query: 61 ttcttttccaaatgcaattgtcttctttaaacatcatcttttaatcccaaggaaataaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttcttttccaaatgcaattgtcttctttaaacatcatcttttaatcccaaggaaataaca 372
Query: 121 gtgtctcatcatctttcaaaattattggtgccaaaatgaaaaagtctcaaaattagtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtgtctcatcatctttcaaaattattggtgccaaaatgaaaaagtctcaaaattagtata 312
Query: 181 attgagcccttggatttcttcagggaagttgtagtaagtccccccaggacatcccagttg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 311 attgagcccttggatttcttcagggaagttgtagtaagtccccccagaacatcccagttg 252
Query: 241 aatctgaaaagtgggaagtgaacgctttcacctgctactgtctcaacattg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 aatctgaaaagtgggaagtgaacgctttcacctgctactgtctcaacattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
