Query= MSMg01no217_i19.b1 MSMg01no217_i19.b1 CHROMAT_FILE:
MSMg01no217_i19.b1 PHD_FILE: MSMg01no217_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:10 2005
(221 letters)
>mm_chr8_79743014_79743634
Length = 621
Score = 404 bits (209), Expect = e-117
Identities = 218/221 (98%)
Strand = Plus / Plus
Query: 1 ctatagatgctttcccacagcctgaggtgatcttctgctctctcctggctaggcgttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctatagatgctttcccacagcctgaggtgatcttctgctctctcctggctaggcgttctc 260
Query: 61 tttggcttcctgttggcaggcttgagtattccagtgtcacatggaagcgtgtcctgtaga 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 261 tttggcttcctgttggcaggcttgagtattccagtgtcacatggaagtgtgtcgtgtaga 320
Query: 121 gacattgtcgtgagcctccttcactagacacggctgctgagacccacccacgctgttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacattgtcgtgagcctccttcactagacacggctgctgagacccacccacgctgttcat 380
Query: 181 gcgttcagaagctctgtagtgctgttttgtcggggtctctg 221
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 gcgttcagaagctctgtagtgctgttttgtcagggtctctg 421
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 621
Length adjustment: 9
Effective length of query: 212
Effective length of database: 612
Effective search space: 129744
Effective search space used: 129744
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no217_i19.g1 MSMg01no217_i19.g1 CHROMAT_FILE:
MSMg01no217_i19.g1 PHD_FILE: MSMg01no217_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:11 2005
(375 letters)
>mm_chr8_79893415_79894188
Length = 774
Score = 619 bits (320), Expect = 0.0
Identities = 359/372 (96%), Gaps = 1/372 (0%)
Strand = Plus / Minus
Query: 1 actgcctcctgttcatcatcgctcaccagtttagtgcacagccactccagtctttgctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 actgcctcctgttcatcatcgctcaccagtttagtgcacagccactccagtctttgctgg 512
Query: 61 tttctgggtggttctgccatccactttcacgcaccttttccttggtcccaggtgcccttg 120
||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct: 511 tttctgggtggttctgccatccactttcatgcatcttttccttggtcccaggtgcccttg 452
Query: 121 ctttgcttccccttccctcctttgtctgcatgagccaatgggtgcagccagtgttagtag 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 451 ctttgcttccccttccctcctttgtctgcatgagccagtgggtgcagccagtgttagtag 392
Query: 181 cttcacaaatgtcccctggagccaagtggactctgcccgagcagcagcttccctcgaatg 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cttcacaaatgttccctggagccaagtggactctgcccgagcagcagcttccctcgaatg 332
Query: 241 atgagaagagactgtaaacaggcgacacgaagatgggcatccctgtgtggtagcacgtgg 300
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 331 atgagaagagactgtaaacaggtgacacgaagatgggcatccctgtgtgatagcacgtgg 272
Query: 301 cagagcagactgtgggacaggttgggctattttttacatattggatttcagcacacctgc 360
||||||||||||||||||| || | ||||| | |||||||||||||||||||||||||
Sbjct: 271 cagagcagactgtgggaca-gtcgtgctatgtgggacatattggatttcagcacacctgc 213
Query: 361 tgtcctcagagg 372
||||||||||||
Sbjct: 212 tgtcctcagagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 774
Length adjustment: 9
Effective length of query: 366
Effective length of database: 765
Effective search space: 279990
Effective search space used: 279990
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
