Query= MSMg01no233_c07.b1 MSMg01no233_c07.b1 CHROMAT_FILE:
MSMg01no233_c07.b1 PHD_FILE: MSMg01no233_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:48 2005
(453 letters)
>mm_chr8_104328745_104329597
Length = 853
Score = 787 bits (407), Expect = 0.0
Identities = 410/411 (99%)
Strand = Plus / Plus
Query: 5 gaattccaatgatattgatgttagctcctgtctattacaagatgagggagaagaacacag 64
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Sbjct: 205 gaattccaatgatattgatgttagctcctgtctattacaagatgagggagaagaacacag 264
Query: 65 ttgcatttgagtcagaggaagtacacactaaataattcttacatatgaattcttgtatac 124
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Sbjct: 265 ttgcatttgagtcagacgaagtacacactaaataattcttacatatgaattcttgtatac 324
Query: 125 ttctccctccatattttcatgttctatgaaatataaggatggtttagaattcatgaagaa 184
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Sbjct: 325 ttctccctccatattttcatgttctatgaaatataaggatggtttagaattcatgaagaa 384
Query: 185 aataaatagaacaaacatataactgtttcctatgggttaattaaacagactgcttctcct 244
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Sbjct: 385 aataaatagaacaaacatataactgtttcctatgggttaattaaacagactgcttctcct 444
Query: 245 tcacagtcaaggccttcccatactgtgatttaattgtctttctggtattatcttcattac 304
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Sbjct: 445 tcacagtcaaggccttcccatactgtgatttaattgtctttctggtattatcttcattac 504
Query: 305 tgtcttacaaacgtgccaagctgcaattttcacttaaaagaacaggaaacatccaactaa 364
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Sbjct: 505 tgtcttacaaacgtgccaagctgcaattttcacttaaaagaacaggaaacatccaactaa 564
Query: 365 gcttctaaatattcaaccatggaatatatatatatatatatatatatatat 415
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Sbjct: 565 gcttctaaatattcaaccatggaatatatatatatatatatatatatatat 615
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 406 atatatatatatatatatatatatatatt 434
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Sbjct: 615 atatatatatatatatatatatatatatt 587
Score = 56.8 bits (29), Expect = 3e-12
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 387 aatatatatatatatatatatatatatat 415
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Sbjct: 616 aatatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 404 atatatatatatatatatatatatatat 431
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Sbjct: 615 atatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 402 atatatatatatatatatatatatatat 429
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Sbjct: 615 atatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 400 atatatatatatatatatatatatatat 427
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Sbjct: 615 atatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 398 atatatatatatatatatatatatatat 425
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Sbjct: 615 atatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 396 atatatatatatatatatatatatatat 423
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Sbjct: 615 atatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 394 atatatatatatatatatatatatatat 421
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Sbjct: 615 atatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 392 atatatatatatatatatatatatatat 419
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Sbjct: 615 atatatatatatatatatatatatatat 588
Score = 54.9 bits (28), Expect = 1e-11
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 390 atatatatatatatatatatatatatat 417
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Sbjct: 615 atatatatatatatatatatatatatat 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 20
Number of successful extensions: 20
Number of sequences better than 10.0: 1
Number of HSP's gapped: 20
Number of HSP's successfully gapped: 11
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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