Query= MSMg01no233_c09.b1 MSMg01no233_c09.b1 CHROMAT_FILE:
MSMg01no233_c09.b1 PHD_FILE: MSMg01no233_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:49 2005
(677 letters)
>mm_chr8_104448908_104449984
Length = 1077
Score = 1257 bits (650), Expect = 0.0
Identities = 668/674 (99%), Gaps = 2/674 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgaactctccaataattttaacatgaatgggtgttgtattttgtcaaaggatt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgaactctccaataattttaacatgaatgggtgttgtattttgtcaaaggatt 264
Query: 65 tttcagcatctaccgagatgatcatgcagttttttttctttagtttgtttacatag-tgg 123
|||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 265 tttcagcatctagtgagatgatcatgcagttttttttctttagtttgtttaca-aggtgg 323
Query: 124 attacattgacagatttctaaatggagatttttgttgtcatttgatttgaattggtcctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 attacattgacagatttctaaatggagatttttgttgtcatttgatttgaattggtcctt 383
Query: 184 ttgacagcacaagttccaactcttaaagactacttatattttttgtgttttaaaattctt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgacagcacaagttccaactcttaaagactacttatattttttgtgttttaaaattctt 443
Query: 244 tggtaaagttttttatcaattcttctgtgaaatctcttggtctatcttttcttccctatc 303
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tggtaaagctttttatcaattcttctgtgaaatctcttggtctatcttttcttccctatc 503
Query: 304 ttggcctcatgggcaatgtctgctctttcctggggtattttccatgtagcaataaattta 363
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 504 ttggcctcatgggcaatgtctgctctttcctggggcattttccatgtagcaataaattta 563
Query: 364 gaaaatttcaaacatcaggaaagattaaggacactttgcatttccaaagttatcaaatga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gaaaatttcaaacatcaggaaagattaaggacactttgcatttccaaagttatcaaatga 623
Query: 424 aagttgtcctttagagcataaaatgtttagtgaaaaataatccttggggagcagtgcctc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aagttgtcctttagagcataaaatgtttagtgaaaaataatccttggggagcagtgcctc 683
Query: 484 actgctgatttttcctaatggaaacatctgatcaactcccaggtgaatattgcttggtga 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 actgctgatttttcctaatggaaacatctgatcaactcccaggtgaatattgcttggtga 743
Query: 544 ttactgaaaccattctattattcaaaacttcaacctcattttaacaggtgagatgtagtt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttactgaaaccattctattattcaaaacttcaacctcattttaacaggtgagatgtagtt 803
Query: 604 gaaatgtccagtgactccaggtaatcttgaacagtgaactccacttaagtgattatgggg 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gaaatgtccagtgactccaggtaatcttgaacagtgaactccacttaagtgattatgggg 863
Query: 664 tgccacttggaagt 677
||||||||||||||
Sbjct: 864 tgccacttggaagt 877
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1077
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1067
Effective search space: 711689
Effective search space used: 711689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_c09.g1 MSMg01no233_c09.g1 CHROMAT_FILE:
MSMg01no233_c09.g1 PHD_FILE: MSMg01no233_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:49 2005
(652 letters)
>mm_chr8_104586906_104587957
Length = 1052
Score = 942 bits (487), Expect = 0.0
Identities = 499/503 (99%)
Strand = Plus / Minus
Query: 1 agaaggaatgatcacacaagaaaatagacaaatttccatggaaagaaatggctgtggttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agaaggaatgatcacacaagaaaatagacaaatttccatggaaagaaatggctgtggttg 444
Query: 61 tgtttcagagtaactgtttaaaacattcaaggccctgggttttatttaactccaaagctg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 443 tgtttcagagtaactgtttaaaacattcaaggccctgggtttcatttaactccaaagctg 384
Query: 121 caaacaaactgataacaacaacaaaaaacaaacataaaagtagtttgagcacaaagaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 caaacaaactgataacaacaacaaaaaacaaacataaaagtagtttgagcacaaagaagc 324
Query: 181 acagagttattgaggaaaaaaaaaactaccaaaatctttagactacaaaattgtcatgcc 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 acagagttattgagggaaaaaaaaactaccaaaatctttagactacaaaattgtcatgcc 264
Query: 241 atgtcagctactcgatagcaagtataatctaaaacagaaatctataagctgtgtagtttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atgtcagctactcgatagcaagtataatctaaaacagaaatctataagctgtgtagtttc 204
Query: 301 atgaggattgcatcccctaaggagataggagctccacaggaagccttagagaatcatcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 atgaggattgcatcccctaaggagataggagctccacaggaagccttagagaatcatcta 144
Query: 361 acctggctgtttgaggctctcagagactgaaccaccaacaaaagaacttacatgtaattg 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 143 acctggctgtttgaggctctcagagactgaaccaccaacaaaagaacttacatgtaatgg 84
Query: 421 acctaggtcccctgcacatatgtagcagatgtacagcttggtcttcatatgggtcctgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 acctaggtcccctgcacatatgtagcagatgtacagcttggtcttcatatgggtcctgaa 24
Query: 481 caactggagtagggcctatcccc 503
|| ||||||||||||||||||||
Sbjct: 23 cacctggagtagggcctatcccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
