Query= MSMg01no237_b06.b1 MSMg01no237_b06.b1 CHROMAT_FILE:
MSMg01no237_b06.b1 PHD_FILE: MSMg01no237_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:48 2005
(527 letters)
>mm_chr8_13460752_13461679
Length = 928
Score = 998 bits (516), Expect = 0.0
Identities = 525/528 (99%), Gaps = 1/528 (0%)
Strand = Plus / Minus
Query: 1 tctatgaggctggctgcagaagcgggctttctatatgcggctttattttgctgttatatt 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 728 tctatgaggctggctgcagaagcgggctttctatatgcggctttattttgttgttatatt 669
Query: 61 ttgggaaaaacccaaaccacattactttttagtctacgacctcctctgtgtcagggtgcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttgggaaaaacccaaaccacattactttttagtctacgacctcctctgtgtcagggtgcg 609
Query: 121 taggggggtggcttctcccctgggaggaagtaggctggtgtgcagggtgaaggagcatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 taggggggtggcttctcccctgggaggaagtaggctggtgtgcagggtgaaggagcatgg 549
Query: 181 gaacacccacggctgggctggcactgggagggagactctgtgtcctcaggcagagagagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 gaacacccacggctgggctggcactgggagggagactctgtgtcctcaggcagagagagg 489
Query: 241 tcagcagaggccgaggctggcggggcactggagggctgcaattaaacagagaggcgtcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcagcagaggccgaggctggcggggcactggagggctgcaattaaacagagaggcgtcct 429
Query: 301 cgatcagcaggtggggggactcagctacgctgtccagcatatacaccagcaccaccttga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cgatcagcaggtggggggactcagctacgctgtccagcatatacaccagcaccaccttga 369
Query: 361 cccagcagcttaccagaccaggaggcaccggctcatc-ggcctctcagaaggcctctcca 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 368 cccagcagcttaccagaccaggaggcaccggctcatcgggcctctcagaaggcctctcca 309
Query: 420 gtctagaacagccaagagacatcagatgtcagcctggacagcatctgattgacacagacc 479
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gtctagaacagccaagagacgtcagatgtcagcctggacagcatctgattgacacagacc 249
Query: 480 tggcttctaaagctgttggggacacaggaaggtctccaaactcctggc 527
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tggcttctaaagctgttggggacacaggaaggtctccaaactcctggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 928
Length adjustment: 10
Effective length of query: 517
Effective length of database: 918
Effective search space: 474606
Effective search space used: 474606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_b06.g1 MSMg01no237_b06.g1 CHROMAT_FILE:
MSMg01no237_b06.g1 PHD_FILE: MSMg01no237_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:48 2005
(309 letters)
>mm_chr8_13423337_13424045
Length = 709
Score = 567 bits (293), Expect = e-166
Identities = 302/305 (99%)
Strand = Plus / Plus
Query: 5 gaattcacctgcttgttgcaatctgcatttggcccagagcaaatccctaaagtgcaaaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacctgcttgttgcaatctgcatttggcccagagcaaatccctaaagtgcaaaag 264
Query: 65 caaaccacacagctttacggtcccttctttgtgctagcttttccaatcatcccatctacc 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaaccacacagctttatggtcccttctttgtgctagcttttccaatcatcccatctacc 324
Query: 125 catgacacatcgatacatatgttccatatgtgtgcactataaggccaaccccacagtaca 184
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 catgacacatcgacacatatgttccatatgtgtgcactataaggccaaccccacagtaca 384
Query: 185 ggttttggttcatacaagctcatttcctaaatagacatgaggcccactattcctgcttct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggttttggttcatacaagctcatttcctaaatagacatgaggcccactattcctgcttct 444
Query: 245 atttaccctctttaaacatttggcatgtctttaatttccttctttggattctagatgctg 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 atttaccctctttaaacatttggcatgtctttaatttccttctttgggttctagatgctg 504
Query: 305 cctgg 309
|||||
Sbjct: 505 cctgg 509
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 309
Length of database: 709
Length adjustment: 9
Effective length of query: 300
Effective length of database: 700
Effective search space: 210000
Effective search space used: 210000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
