Query= MSMg01no237_f16.b1 MSMg01no237_f16.b1 CHROMAT_FILE:
MSMg01no237_f16.b1 PHD_FILE: MSMg01no237_f16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:10 2005
(237 letters)
>mm_chr8_10789728_10790364
Length = 637
Score = 420 bits (217), Expect = e-122
Identities = 229/233 (98%)
Strand = Plus / Plus
Query: 1 ttagcttttaaaaaaatggaaaatttttcctccttttctcgtgatggatacgaaagccat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagcttttaaaaaaatggaaaatttttcctccttttctcgtgatggatacgaaagccat 260
Query: 61 cctatggcaccaaggaagcacacatctattgaaaagcaactctataaaacgaagcagctt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctgtggcaccaaggaagcacacatctattgaaaagcaactctataaaacgaagcagctt 320
Query: 121 catatttacaaaggatctcttagatgctcagttttggaaacaacagcaaacttctcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catatttacaaaggatctcttagatgctcagttttggaaacaacagcaaacttctcactc 380
Query: 181 gtgtgtctgcatcttgttccctgtgatacaccaggactgctctctaccatgga 233
|||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 381 gtgtgtctgcatcttggcccctgtgatactccaggactgctctctaccatgga 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no237_f16.g1 MSMg01no237_f16.g1 CHROMAT_FILE:
MSMg01no237_f16.g1 PHD_FILE: MSMg01no237_f16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:55:10 2005
(290 letters)
>mm_chr8_10957546_10958234
Length = 689
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 atggggaactgccttccattcgctctacctcgtgtgtcgataaaataacccatttatggt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 489 atggggaactgccttccattcgctctacctcgtgtgtcgataaaatgacccatttatggt 430
Query: 61 tttaaaattcagatttcatctatacaaacactgctctgtggccatctaaaagtgttctaa 120
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 429 tttaaaattcagatttcatctacacaaacactgctctgtggccgtctaaaagtgttctaa 370
Query: 121 ggacaaagccgctgctttctagctatacataggcactcattgttttatttgtttttccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggacaaagccgctgctttctagctatacataggcactcattgttttatttgtttttccaa 310
Query: 181 gctgatggaaattgtttcccagatgacgtgggagctggtgtactgcagaatggagcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gctgatggaaattgtttcccagatgacgtgggagctggtgtactgcagaatggagcaggc 250
Query: 241 cctctaggagtctgtgccctggctcacaggatgcagagctttgaatggcc 290
|||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 249 cctctaggagtc-gtgccctggctcacaggatgcagagctttgaaaggcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
