Query= MSMg01no260_d20.b1 MSMg01no260_d20.b1 CHROMAT_FILE:
MSMg01no260_d20.b1 PHD_FILE: MSMg01no260_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:17 2005
(637 letters)
>mm_chr8_10743142_10744178
Length = 1037
Score = 1081 bits (559), Expect = 0.0
Identities = 615/635 (96%), Gaps = 4/635 (0%)
Strand = Plus / Minus
Query: 5 ggaattcagagtgtgttcccaaaggccagggcattatgcagtcagtatttctcaaagacg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ggaattcagagtgtggggccaaaggccagggcattatgcagtcagtatttctcaaagacg 778
Query: 65 aattttcacagctaaagatatttgactcaagtctaatttgcttcattgacatgtcaatta 124
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 777 aattttcacagctaaagatatttgactcaagtctaatttgcttcattgatatgtcaatta 718
Query: 125 acatttggagatcacttaatcaattagacatcttctcaaacgttcaagagtgattcaggt 184
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 717 acatttggagatcacttaatcaattagacatcttctcaaacattcaagagtgattcaggt 658
Query: 185 aacttcatggctctactgttgctcctgatgcttgctggctatactgtagatggggaataa 244
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 657 aacttcatggctctactgttgctcctgatgcttgctggctataccgtagatggggaagaa 598
Query: 245 gtttacagccagtgctctctgccagagagtcctgtagacacacctgctgccctctgtgtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gtttacagccagtgctctctgccagagagtcctgtagacacacctgctgccctctgtgtg 538
Query: 305 agaggaaacagacagtctggggctgtgctcagcacctgtgcaggtagtggaagaaatcct 364
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 537 agaggaaacagtcagtctggggctgtgctcagcacctgtgcaggtagtggaggaaatcct 478
Query: 365 cctgccaaaccaaccgtg--ttagatgctaagtgtatgtgctttctccctaagggtgcgc 422
||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 cctgccaaaggga--gtgagttagatgctaagtgtatgtgctttctccctaagggtgcgc 420
Query: 423 tgcttctctaccccactgagagcacgcctgttctaagctcgttgcagtcttgtagaccta 482
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 419 tgcttctctaccccactgagagcacgcctgttctaagctcattgcagtcttgtagaccta 360
Query: 483 agccctctgcatccagccatttgcatgcagtctgtggctcgccattcctcccactcaccg 542
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 359 tgccctctgcatccagccatttgcatgcagtctgtggctcgccattcctctcactcaccg 300
Query: 543 tgccttctgctggaaagcagatctggaagcacgtgctgggctctgggggaacaggtggct 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tgccttctgctggaaagcagatctggaagcacgtgctgggctctgggggaacaggtggct 240
Query: 603 ggcagcacggtctcatttttcctccccttctggaa 637
||||| |||||||||||||||||||||||||||||
Sbjct: 239 ggcagtacggtctcatttttcctccccttctggaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_d20.g1 MSMg01no260_d20.g1 CHROMAT_FILE:
MSMg01no260_d20.g1 PHD_FILE: MSMg01no260_d20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:17 2005
(438 letters)
>mm_chr8_10559280_10560117
Length = 838
Score = 787 bits (407), Expect = 0.0
Identities = 425/431 (98%)
Strand = Plus / Plus
Query: 1 tgtgaagaaagctcaatcagggacaaggctgaccatcacactatcttagtgatatcctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgaagaaagctcaatcagggacaaggctgaccatcacactatcttagtgatatcctct 260
Query: 61 gtgctgtgattaaaattcccctacgcagaggaacgtaagggtttgttggggcttacggcg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgctgtgattaaaattcccctacgcagaggaacgtaagggtttgttggggcttacggcg 320
Query: 121 actcggggatctagtctgtcttggtgaggaacatgaggccgagagtgaacaggaagtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actcggggatctagtctgtcttggtgaggaacatgaggccgagagtgaacaggaagtggg 380
Query: 181 ggtggcctatgaagtctcaatgcacaaccacaatggttcacttcctccagccgtgatctg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 ggtggcctatgaagtctcaatgcacaaccacaatggttcacttcctccagccatgatctg 440
Query: 241 cctcttgagggttcctcactctttcaaatggcaccaccagctggagagtatccaagcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctcttgagggttcctcactctttcaaatggcaccaccagctggagagtatccaagcatc 500
Query: 301 tgagacagtgtgggacacttcacattggaagaggaattaggacgccccaccaaattctta 360
|||||||||||||||||||||||||||||||||||||||||| | | | ||||||||||
Sbjct: 501 tgagacagtgtgggacacttcacattggaagaggaattaggatgtgctagcaaattctta 560
Query: 361 ttctgggttgaatgtgttaattcttggttgtagtgcttgtgtattcatgtgtgtgtgtgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgggttgaatgtgttaattcttggttgtagtgcttgtgtattcatgtgtgtgtgtgt 620
Query: 421 gtgtgtgtgtg 431
|||||||||||
Sbjct: 621 gtgtgtgtgtg 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
