XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
CTCAAGTTTTCCCGCAGTATCCATGAGAGAATAGTAACATGCACATAGGC
ACACACAAACACACACACACACACAAACACACATAAACGCAGATAGGTAC
ACAGACACTCAATATATACATACAAGCAAACATATATAAAAATATACATA
TACATATGTCCATACACATATACATACATATGCAAGATACACATGCAAAT
AAATTGAAAACATTTTTAAAAAGCTAAATAGTTGTAAAGTGAGCAATGCT
TTTTGGATCCATCAAAGAATTGAAGGCATGTGGCAAATCACAACCTCTAA
ACATGGAAAGACAGGTAGAAATAAATATCAGAGCAAAAACTTAATAGACG
AACCCACAGAAAAAAAATCAATGTCCATAGACAGCATCCTAAGATGCACT
ACTGAGTTACCATAGGCTTGGTGTACCTAACTCTGAGAGCCAAACTTTCT
GGTGTGATGACATCATAGGAAGGCTACATTCTGTTCTTAGTTTTACTTTC
TTGATCTCTACCAAGCCCTCACTGTGAATACTGGATTCTTTTATGCAACC
TGCATCAGGAAGATAAGACAACCAACTTGAAATATGTCAAACTTTCTGCT
TCTTTTAAAGAAGTCTATGTTAAGGGAGAAATGGGTTAAGCAGAGCCCAC
TCTAATGCCGTTGTATGACAAAGGAGTAACCTAGGAGAGGGCTCTTCTAA
CTTAG

GATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXACCTGATCCATTCCATTGTTAAGAATTC
ATTCTTGCCTGGAGTGGTGGCACACATCTTTAATCCCAGCACATGGGAGG
AAGAAGCAGGCAGATTTCTGAGTTGGCGAATCGTGATCTACAGAGTGAAT
TCCACAACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAAACAAACAAA
CAAACAAAAAACCCATAAAGCAAAAAAACAAAAACTAAACAAAACAACAA
AAAACAATTCATTCTTGAAGATGATCTGTGGCCACCACCACAATCATTAT
GTAAGCACAAAGTTTCAACTAATTAAAATAACCCCTATACCAAAACAAAC
AGACTGATAAAAAATCAAAAACAAAACAACAACACTCCCTGGCACACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
CACACACAATTTTGTAGGAAAGTGTAAAACACACATATATTATTATTTCT
CCACCATCCCTCTACTACAAACTCTGTAATAATGATGCGTTTACAGAGAG
AGATAGAGGAATAGAGGAAGGGAAGGAAGAAGAGGAGAAGGGAAGGAGGT
ATAATTCAAATACACCATTATTTTTATTTTTTTTTCCGTGTCCCCCTTTC
CCCCTTTTTTTACATTTTACCTTCC

Query= MSMg01no262_l23.g1 MSMg01no262_l23.g1 CHROMAT_FILE:
MSMg01no262_l23.g1 PHD_FILE: MSMg01no262_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:28 2005
         (576 letters)



>mm_chr8_105681588_105682564
          Length = 977

 Score =  915 bits (473), Expect = 0.0
 Identities = 546/599 (91%), Gaps = 47/599 (7%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctgatccattccattgttaagaattcattcttgcctggagtggtggcacacatcttta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 acctgatccattccattgttaagaattcattcttgcctggagtggtggcacacatcttta 736

                                                                       
Query: 61  atcccagcacatgggaggaagaagcaggcagatttctgagttggcgaatcgtgatctaca 120
           |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 735 atcccagcacttgggaggaagaagcaggcagatttctgagttggcgaatcgtggtctaca 676

                                                                       
Query: 121 gagtgaattccacaacagccagggctatacagagaaaccctgtctcgaaacaaacaaaca 180
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gagtgaattccagaacagccagggctatacagagaaaccctgtctcgaaacaaacaaaca 616

                                                                       
Query: 181 aacaaaaaacccataaagcaaaaaaa-------caaaa----actaaacaaaa------- 222
           ||||||||||||||||||||||||||       |||||    || ||||||||       
Sbjct: 615 aacaaaaaacccataaagcaaaaaaaaaaaaaacaaaacaaaacaaaacaaaaaaaaaaa 556

                                                                       
Query: 223 -----caacaaaaaacaattcattcttgaagatgatctgtggccaccaccacaatcatta 277
                |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aaaaacaacaaaaaacaattcattcttgaagatgatctgtggccaccaccacaatcatta 496

                                                                       
Query: 278 tgtaagcacaaagtttcaactaattaaaataacccctataccaaaacaaacagactgata 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 495 tgtaagcacaaagtttcaactaattaaaataacccctataccaaaacaaacagacagata 436

                                                                       
Query: 338 aaaaatcaaaaacaaaacaacaacactccctggcacacacacacacacacacacacacac 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aaaaatcaaaaacaaaacaacaacactccctggcacacacacacacacacacacacacac 376

                                                                       
Query: 398 acacacacacacacacacacacacacacacacacacacaattttgtaggaaagtgtaaaa 457
           |||||||||||||||                        |||||||||||||||||||||
Sbjct: 375 acacacacacacaca------------------------attttgtaggaaagtgtaaaa 340

                                                                       
Query: 458 cacacatatattattatttctccaccatccctctactacaaactctgtaataatgatgcg 517
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 339 cacacatatattattatttctccaccatccctctactacaaactctgtaataatgatgtg 280

                                                                      
Query: 518 tttacagagagagatagaggaatagaggaagggaaggaagaagaggagaagggaaggag 576
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tttacagagagagatagaggaatagaggaagggaaggaagaagaggagaagggaaggag 221


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 22
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 977
Length adjustment: 10
Effective length of query: 566
Effective length of database: 967
Effective search space:   547322
Effective search space used:   547322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)