Query= MSMg01no263_c14.b1 MSMg01no263_c14.b1 CHROMAT_FILE:
MSMg01no263_c14.b1 PHD_FILE: MSMg01no263_c14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:00 2005
(285 letters)
>mm_chr8_118685077_118685760
Length = 684
Score = 513 bits (265), Expect = e-150
Identities = 280/287 (97%), Gaps = 5/287 (1%)
Strand = Plus / Minus
Query: 1 ctcacaggtccatgctaaggacagagttactgaggatgacgagggacct--cccatcagt 58
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 484 ctcacaggtccatgctaaggacagagttactgaggatgacgagggacctaa---atcagt 428
Query: 59 ccgtaatgaactgagggagaagccgttgggtccttgttccatttatttatgcctcttctc 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ccgtaatgaactgagggagaagccgttgggtccttgttccatttatttatgcctcttctc 368
Query: 119 tgagtgccaccagctgaagtaacatgagatactgcagtgtctcagagggtaaaagtttct 178
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 367 tgagtgccaccagctgaagtaacatgagatgctgcagtgtctcagagggtaaaagtttct 308
Query: 179 cctaggttggggcagctgacacagcttctccaagtgggtgatcattcagctgagccccgg 238
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 cctaggctggggcagctgacacagcttctccaagtgggtgatcattcagctgagccccgg 248
Query: 239 agcatgcattgagtattcaagtgcaggctgggtgctgaagacttaaa 285
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agcatgcattgagtattcaagtgcaggctgggtgctgaagacttaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 684
Length adjustment: 9
Effective length of query: 276
Effective length of database: 675
Effective search space: 186300
Effective search space used: 186300
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no263_c14.g1 MSMg01no263_c14.g1 CHROMAT_FILE:
MSMg01no263_c14.g1 PHD_FILE: MSMg01no263_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:00 2005
(341 letters)
>mm_chr8_118520758_118521498
Length = 741
Score = 547 bits (283), Expect = e-160
Identities = 325/345 (94%), Gaps = 12/345 (3%)
Strand = Plus / Plus
Query: 1 agtgttttggggacgtgcaatcaggtcacttactgaatgctggcccctctccttgtgcta 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 201 agtgttttggggatgtgcaatcaggtcacttactgaatgctggcccctctcctcgtgcta 260
Query: 61 caaggatgaggcatctgataccagcctgaaggctgctccttcctctctcagagctgactt 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 caaggatgaggcatctgataccagcctgaaggctgctcctttctctctcagagctgactt 320
Query: 121 tattgatcccctcatcctaaccggagcaggagaggaaggagcaacaaagaaacatagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 tattgatcccctcatcctaaccggagcaggagaggaaggagcaacaaggaaacatagcaa 380
Query: 181 agtgggaagcagaggctgccgggtcttgtctatactcacagacatgggagcagctgaaag 240
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtgggaagcgggggctgccgggtcttgtctatactcacagacatgggagcagctgaaag 440
Query: 241 attatgaagaagcccaggattaacctgcagccctggctttcttcttttgttttcc---cc 297
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 441 attaggaagaagcccaggattaacctgcagccctggctttcttcttctgttttccaatc- 499
Query: 298 ccccc---tcccagatggtagccatttttaattctccatttatct 339
|||||||||||||||||||||||||||||||||||||
Sbjct: 500 -----aattcccagatggtagccatttttaattctccatttatct 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
