Query= MSMg01no264_k17.b1 MSMg01no264_k17.b1 CHROMAT_FILE:
MSMg01no264_k17.b1 PHD_FILE: MSMg01no264_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:55 2005
(198 letters)
>mm_chr8_58717434_58718031
Length = 598
Score = 296 bits (153), Expect = 6e-85
Identities = 184/204 (90%), Gaps = 14/204 (6%)
Strand = Plus / Plus
Query: 1 gggttttatttttagntcatagntagaatcataaagntgtatgtaaaanagggntacctg 60
||||||||||||||| |||||| ||||||||||||| ||||||||||| |||| ||||||
Sbjct: 201 gggttttatttttagctcatagctagaatcataaagctgtatgtaaaacagggctacctg 260
Query: 61 tggttctttctccaagagccactctgttgcctaaaatttctgttctaaatctgacaaaat 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggttctttctccgagagccactctgttgcctaaaatttctgttctaaatctgacaaaat 320
Query: 121 aagagcgctcaaagtttgttttttagactttgctcttttttt-------gtctaaatttc 173
||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 aagagcgctcaaagtttgttttttagactttgctc-------aaacaaagtctaaatttc 373
Query: 174 aagaatgggttatcaattgaaggt 197
||||||||||||||||||||||||
Sbjct: 374 aagaatgggttatcaattgaaggt 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 598
Length adjustment: 8
Effective length of query: 190
Effective length of database: 590
Effective search space: 112100
Effective search space used: 112100
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_k17.g1 MSMg01no264_k17.g1 CHROMAT_FILE:
MSMg01no264_k17.g1 PHD_FILE: MSMg01no264_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:55 2005
(261 letters)
>mm_chr8_58805068_58805728
Length = 661
Score = 269 bits (139), Expect = 1e-76
Identities = 139/139 (100%)
Strand = Plus / Minus
Query: 123 gcagtctctctttcttgtggcaattccacatagagtggctaagatgttaactcacagtaa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gcagtctctctttcttgtggcaattccacatagagtggctaagatgttaactcacagtaa 402
Query: 183 tagatatagaagccaaactgggtcaataatagtgcagtcatgataaccttggaattatgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tagatatagaagccaaactgggtcaataatagtgcagtcatgataaccttggaattatgt 342
Query: 243 ggtatgagatggaaaatat 261
|||||||||||||||||||
Sbjct: 341 ggtatgagatggaaaatat 323
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 661
Length adjustment: 9
Effective length of query: 252
Effective length of database: 652
Effective search space: 164304
Effective search space used: 164304
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
