Query= MSMg01no266_n21.b1 MSMg01no266_n21.b1 CHROMAT_FILE:
MSMg01no266_n21.b1 PHD_FILE: MSMg01no266_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:46 2005
(699 letters)
>mm_chr8_128045037_128046135
Length = 1099
Score = 1031 bits (533), Expect = 0.0
Identities = 557/565 (98%), Gaps = 1/565 (0%)
Strand = Plus / Minus
Query: 135 agcagtgttttttcaacctgtgggtcacgtcccgtctggggtcacctaagaacgggaaaa 194
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 1099 agcagtgttttttcaacctgtgggtcacgtcccgtctggggtcgcctaagaccgggaaaa 1040
Query: 195 acacagatatttgcattacaattcataacagtagcaaattttcatgaattatgaagtagc 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1039 acacagatatttgcattacaattcataacagtagcaaattttcatgaattatgaagtagc 980
Query: 255 aataaaaataattttttatggtcaccacaataggaggaactgtatcataggtggcagcat 314
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 979 aataaaaataa-tttttatggtcaccacaataggagggactgtatcataggtggcagcat 921
Query: 315 taggaaggtttataaccactgctctagagccactgtaagttctttggatgcaaatcctgg 374
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 taggaaggttgagaaccactgctctagagccactgtaagttctttggatgcaaatcctgg 861
Query: 375 accccatggcaaggctgagggacctgctgcctgtgcctctgattctgagcctcagaacaa 434
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 atcccatggcaaggctgagggacctgctgcctgtgcctctgattctgagcctcagaacaa 801
Query: 435 gaacgattgctcattgaaggagaaacccagctgctccgaggggcttcagtgacttctcat 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 gaacgattgctcattgaaggagaaacccagctgctccgaggggcttcagtgacttctcat 741
Query: 495 cagctgctttgcgcttcctaaagatggaggcagactgaggaaggtcggctttctaaagca 554
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 740 cagctgctttgcgcttcctaaagatggaggcagactgaggaaggtcggttttctaaagca 681
Query: 555 gaggccagtgacagccttctgcataagtgataagcttgtcttcatgtcgtagtggagtgg 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gaggccagtgacagccttctgcataagtgataagcttgtcttcatgtcgtagtggagtgg 621
Query: 615 ttcatgaaggtaccgcgtcagcacggccgcttctgagcaggtcggtggggatcctcctta 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ttcatgaaggtaccgcgtcagcacggccgcttctgagcaggtcggtggggatcctcctta 561
Query: 675 ctgcgggctgcctcatcttgctgga 699
|||||||||||||||||||||||||
Sbjct: 560 ctgcgggctgcctcatcttgctgga 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no266_n21.g1 MSMg01no266_n21.g1 CHROMAT_FILE:
MSMg01no266_n21.g1 PHD_FILE: MSMg01no266_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:46 2005
(291 letters)
>mm_chr8_127875727_127876417
Length = 691
Score = 516 bits (267), Expect = e-151
Identities = 285/291 (97%)
Strand = Plus / Plus
Query: 1 acaggctatatttgtttttattgtgtatgttttctggtaggatggagtctattgatctgt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 acaggctatatttgtttttattgtgtatgttttctggtaggatggagtctattgatctat 260
Query: 61 gcccacgtgactaaagacggagggtgaagaggaagaatgtccgaactcacactgagagag 120
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcccatgtgactaaagatggagggtgaagaggaagaatgtccgaactcacactgagagag 320
Query: 121 agattgaaaggagcaaaacagaagccagaatcaacggaatgccaggtcacacgcaggaac 180
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 agattgaaaggagcgaaacagaagccagaatcaacggaatgtcaggtcacacgcaggaac 380
Query: 181 aagcactgcagaggccttagaaattagtccggtgaaacacttcccaaagcagagagaaga 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 aagcactgcagaggccttagaaattagtctggtgaaacacttcccaaagcagagagaaga 440
Query: 241 aagaaattctagtccaggccaggacaagacccctggaaggaaaataatgag 291
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagaaattctagtccaggccaggacaagacccctggaaggaaaataatgag 491
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
