Query= MSMg01no267_g11.b1 MSMg01no267_g11.b1 CHROMAT_FILE:
MSMg01no267_g11.b1 PHD_FILE: MSMg01no267_g11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:28 2005
(379 letters)
>mm_chr8_94326128_94326907
Length = 780
Score = 683 bits (353), Expect = 0.0
Identities = 371/377 (98%), Gaps = 1/377 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcgccaaaagaaaaacgctgggtctggggaccagagagcggaaaggggagggg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 ggaattctcgccaaaagaaaaacgctgggtctggggaccagagagcggaaaggggagggg 521
Query: 64 gatagtgaaatgaatggtcgcaatt-aaaaaaaaaaaatcacaccaacatagaaacttct 122
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 520 gatagtgaaatgaatggtcgcaattaaaaaaaaaaaaatcacaccaacatagaaacttct 461
Query: 123 cggaagagctttcggaaagttcccagagcctaggctctaagtttctctgctcctccccca 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 cggaagagctttcggaaagttcccagagcctaggctctaagtttctctgctcctccccca 401
Query: 183 ctccatagccaggagctccaccaactccttgcttgttccaccagaccacctaggcgccaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ctccatagccaggagctccaccaactccttgcttgttccaccagaccacctaggcgccaa 341
Query: 243 actcactatttcttgtgaggattctcaacaaggtaccctggaggtgtaaatgtagcaaac 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 actcactatttcttgtgaggattctcaacaaggtaccctggaggtgtaaatgtagcaaac 281
Query: 303 tgcggggttcccctgttttccccccacccagcccagaataggtcttttaaagctcggaga 362
||||||||||||| | |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 280 tgcggggttcccccgccctccccccacccagcacagaataggtcttttaaagctcggaga 221
Query: 363 ggcagcactcccaactc 379
|||||||||||||||||
Sbjct: 220 ggcagcactcccaactc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 780
Length adjustment: 9
Effective length of query: 370
Effective length of database: 771
Effective search space: 285270
Effective search space used: 285270
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_g11.g1 MSMg01no267_g11.g1 CHROMAT_FILE:
MSMg01no267_g11.g1 PHD_FILE: MSMg01no267_g11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:28 2005
(598 letters)
>mm_chr8_94145300_94146297
Length = 998
Score = 1118 bits (578), Expect = 0.0
Identities = 593/598 (99%)
Strand = Plus / Plus
Query: 1 atctaaggaatgccatgcagatagacccaccacacaagaagccttagtccatggatggtc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atctaaggaatgccatgcagatagacccaccacacaagaagccttagtcaatggatggtc 260
Query: 61 ggtcttcaggaaatcacagtactaaagccacatctccttagggacctttgagatggtctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtcttcaggaaatcacagtactaaagccacatctccttagggacctttgagatggtctg 320
Query: 121 tttaccagacccactttttagggtctcattccctgtaaacagaggcttccctgcacagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaccagacccactttttagggtctcattccctgtaaacagaggcttccctgcacagga 380
Query: 181 acctgtggtgtggctgacttagaacctgcgaatggatgtaaaaggcagctcttctgtcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acctgtggtgtggctgacttagaacctgcgaatggatgtaaaaggcagctcttctgtcca 440
Query: 241 tgcgctctccatcctcggcagaatagagcccagacacaggaccaggctcctcagaggctc 300
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 441 tgcgctctccatcctcggcagaatagagcccagacacaggaccaggcaccacagaggctc 500
Query: 301 agtaatacactgaagatgagccggctcccatgacctccaaggacgaacaaagcaggcagg 360
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 501 agtaatacactgaagatgagccggctcccatgacctccaaggatgaagaaagcaggcagg 560
Query: 361 ccacagtgagagaagagtaagatgctgccatcctcctgcagggtgcctgttgtaggtgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccacagtgagagaagagtaagatgctgccatcctcctgcagggtgcctgttgtaggtgga 620
Query: 421 cagaggatacagtgtaagagagacatccaggaacatggctctcccccatcccctgcacaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagaggatacagtgtaagagagacatccaggaacatggctctcccccatcccctgcacaa 680
Query: 481 atatgacaacagaaaaaaaaaaaaacatttgtgtttagggcctttttatgttcccataaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atatgacaacagaaaaaaaaaaaaacatttgtgtttagggcctttttatgttcccataaa 740
Query: 541 aagaattctccctttgcacaccaccactgcatggatttttgttgtggatttttgtagt 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aagaattctccctttgcacaccaccactgcatggatttttgttgtggatttttgtagt 798
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space: 580944
Effective search space used: 580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
