CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTGTTACAAAGTGACATTCAACTCCAGCTTGGAGATTAGGCAGGGAC
ATTCCTCAAAATTACCAAGGTTGTATCAGGAGCTGTGTCCACTAGAGAGC
TGGCTTACGGGTTTTATTTTTAGCTCATAGCTAGAATCATAAAGCTGTAT
GTAAAACAGGGCTACCTGTGGTTCTTTCTCCAAGAGCCACTCTGTTGCCT
AAAATTTCTGTTCTAAATCTGACAAAATAAGAGCGCTCAAAGTTTGTTTT
TTAGACTTTGCTCAAACAAAGTCTAAATTTCAAGAATGGGTTATCAATTG
AAGGTCGGCATTATGTTAANTTGCCCCCCGCCACCAGGAAACACTCTCTA
GAAAACACATGGCATTTTTAGACTTATTTCTAAACCTCAACGTGCTGAGC
CTGTTTGTGGTCAATGTCTAAAGTGTTACATGCTGCTTCAGACTTCCATT
ATAAATTGTATCATTTTTAATATGAAGGGACATTAATTTTATGGAAAACT
GTTTTATTATTTATAAGGAAAATTGTATTGATTGAACACCTGTCTTTCTG
TGTGTCTGTAAAAGGAAAAGTGCTACATTTCTTTGAGAGTTAGACTTTTC
ATGGATGGTGATTTATAATATTGGACATCAAAATAATGTTGACTAAAATA
ACTCCAGAGTAACGATTAAATTTTATTTAATTACACTTCTGTCATTTGCN

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTT
TAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATAT
ATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTC
CCAATCTGTTGGTGGTCTTTTTGTCCTATTGACGGTGTCTTTTGCCTTGC
AGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCTTACA
GAGCAAGCCATTGCTGTTCTGTTCAGGAATCTTTCCCCTGTACCCATATC
TTCAAGGCTTTTCCCCTCTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTT
TTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGAT
AAGTATGGATCGATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCA
GCACCAGCAGTCTCTCTTTCTTGTGGCAATTCCACATAGAGTGGCTAAGA
TGTTAACTCACAGTAATAGATATAGAAGCCAAACTGGGTCAATAATAGTG
CAGTCATGATAACCTTGGAATTATGTGGTATGAGATGGAAAATATTAGGC
ATACTTGAGTTTCAGAGAAGCTAGTANAACCCACTANAATCATAAAAGAG
AGAAGAGAAAGAGGGAGATACCAGGGGAAGAAAACTGCACATT

Query= MSMg01no267_l19.b1 MSMg01no267_l19.b1 CHROMAT_FILE:
MSMg01no267_l19.b1 PHD_FILE: MSMg01no267_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:52 2005
         (318 letters)



>mm_chr8_58717320_58718037
          Length = 718

 Score =  592 bits (306), Expect = e-173
 Identities = 312/314 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgttacaaagtgacattcaactccagcttggagattaggcagggacattcctca 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgttacaaagtgacattcaactccagcttggagattaggcagggacattcctca 264

                                                                       
Query: 65  aaattaccaaggttgtatcaggagctgtgtccactagagagctggcttacgggttttatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaattaccaaggttgtatcaggagctgtgtccactagagagctggcttacgggttttatt 324

                                                                       
Query: 125 tttagctcatagctagaatcataaagctgtatgtaaaacagggctacctgtggttctttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttagctcatagctagaatcataaagctgtatgtaaaacagggctacctgtggttctttc 384

                                                                       
Query: 185 tccaagagccactctgttgcctaaaatttctgttctaaatctgacaaaataagagcgctc 244
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tccgagagccactctgttgcctaaaatttctgttctaaatctgacaaaataagagcgctc 444

                                                                       
Query: 245 aaagtttgttttttagactttgctcaaacaaagtctaaatttcaagaatgggttatcaat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaagtttgttttttagactttgctcaaacaaagtctaaatttcaagaatgggttatcaat 504

                         
Query: 305 tgaaggtcggcatt 318
           |||||||| |||||
Sbjct: 505 tgaaggtcagcatt 518


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space:   219081
Effective search space used:   219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no267_l19.g1 MSMg01no267_l19.g1 CHROMAT_FILE:
MSMg01no267_l19.g1 PHD_FILE: MSMg01no267_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:52 2005
         (602 letters)



>mm_chr8_58804727_58805728
          Length = 1002

 Score =  329 bits (170), Expect = 4e-94
 Identities = 170/170 (100%)
 Strand = Plus / Minus

                                                                       
Query: 433 gcagtctctctttcttgtggcaattccacatagagtggctaagatgttaactcacagtaa 492
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 gcagtctctctttcttgtggcaattccacatagagtggctaagatgttaactcacagtaa 743

                                                                       
Query: 493 tagatatagaagccaaactgggtcaataatagtgcagtcatgataaccttggaattatgt 552
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tagatatagaagccaaactgggtcaataatagtgcagtcatgataaccttggaattatgt 683

                                                             
Query: 553 ggtatgagatggaaaatattaggcatacttgagtttcagagaagctagta 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggtatgagatggaaaatattaggcatacttgagtttcagagaagctagta 633


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space:   587264
Effective search space used:   587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)